Detailed information of Lsat_s043.g0118.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s043.g0118.t1SORTING NEXIN-4Lsat_scaffold04328999172922085-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00787PXPX domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR001683DomainPhox homologyInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR034783FamilySorting nexin-4Interproscan
IPR034902DomainSorting nexin 4, PX domainInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR037430DomainSorting nexin-4, BAR domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46596SORTING NEXIN-4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:2000786Biological Processpositive regulation of autophagosome assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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