| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s031.g0263.t1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER | Lsat_scaffold031 | 5763503 | 5832757 | + |
| CDS | |||||
| Lsat_s031.g0263.t1 | |||||
| Transcript |
| Lsat_s031.g0263.t1 |
| Protein |
| Lsat_s031.g0263.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00209 | SNF | Sodium:neurotransmitter symporter family | Family | Interproscan |
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF00402 | Calponin | Calponin family repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000175 | Family | Sodium:neurotransmitter symporter | Interproscan |
| IPR000557 | Repeat | Calponin repeat | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR037272 | Homologous_superfamily | Sodium:neurotransmitter symporter superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11616 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0015179 | Molecular Function | L-amino acid transmembrane transporter activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0035725 | Biological Process | sodium ion transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
