| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s018.g0481.t1 | PEPTIDOGLYCAN RECOGNITION PROTEIN | Lsat_scaffold018 | 11060100 | 11100818 | - |
| CDS | |||||
| Lsat_s018.g0481.t1 | |||||
| Transcript |
| Lsat_s018.g0481.t1 |
| Protein |
| Lsat_s018.g0481.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01510 | Amidase_2 | N-acetylmuramoyl-L-alanine amidase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR002502 | Domain | N-acetylmuramoyl-L-alanine amidase domain | Interproscan |
| IPR006619 | Domain | Peptidoglycan recognition protein family domain, metazoa/bacteria | Interproscan |
| IPR015510 | Family | Peptidoglycan recognition protein | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR036505 | Homologous_superfamily | N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11022 | PEPTIDOGLYCAN RECOGNITION PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0008745 | Molecular Function | N-acetylmuramoyl-L-alanine amidase activity | Interproscan |
| GO:0009253 | Biological Process | peptidoglycan catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
