Detailed information of Lsat_s017.g0234.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s017.g0234.t1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHALsat_scaffold01751656265185660+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF04086SRP-alpha_NSignal recognition particle, alpha subunit, N-terminalFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR007222DomainSignal recognition particle receptor, alpha subunit, N-terminalInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036225Homologous_superfamilySRP/SRP receptor, N-terminalInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005047Molecular Functionsignal recognition particle bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005785Cellular Componentsignal recognition particle receptor complexInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006605Biological Processprotein targetingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0045047Biological Processprotein targeting to ERInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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