| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s017.g0025.t1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED | Lsat_scaffold017 | 504148 | 564062 | + |
| CDS | |||||
| Lsat_s017.g0025.t1 | |||||
| Transcript |
| Lsat_s017.g0025.t1 |
| Protein |
| Lsat_s017.g0025.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF10358 | NT-C2 | N-terminal C2 in EEIG1 and EHBP1 proteins | Domain | Interproscan |
| PF12130 | bMERB_dom | Bivalent Mical/EHBP Rab binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR019448 | Domain | NT-type C2 domain | Interproscan |
| IPR022735 | Domain | bMERB domain | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR050540 | Family | F-actin Monooxygenase Mical | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23167 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005815 | Cellular Component | microtubule organizing center | Interproscan |
| GO:0030036 | Biological Process | actin cytoskeleton organization | Interproscan |
| GO:0031941 | Cellular Component | filamentous actin | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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