Detailed information of Lsat_s016.g0411.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s016.g0411.t1GLUCOSE INHIBITED DIVISION PROTEIN ALsat_scaffold0161106180811073086-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01134GIDAGlucose inhibited division protein AFamilyInterproscan
PF13932GIDA_CtRNA modifying enzyme MnmG/GidA C-terminal helical bundleDomainInterproscan
PF21680GIDA_C_1sttRNA modifying enzyme MnmG/GidA C-terminal helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002218FamilytRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-relatedInterproscan
IPR026904DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR040131DomainMnmG, N-terminal domainInterproscan
IPR044920Homologous_superfamilytRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamilyInterproscan
IPR047001DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomainInterproscan
IPR049312DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11806GLUCOSE INHIBITED DIVISION PROTEIN AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0070899Biological Processmitochondrial tRNA wobble uridine modificationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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