Detailed information of Lsat_s016.g0218.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s016.g0218.t1TRNA (URACIL-5-)-METHYLTRANSFERASELsat_scaffold01657255995744167-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05958tRNA_U5-meth_trtRNA (Uracil-5-)-methyltransferaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR010280Family(Uracil-5)-methyltransferase familyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR030390Active_siteRNA methyltransferase TrmA, active siteInterproscan
IPR034262DomainTRMT2A, RNA recognition motifInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR045850FamilytRNA (uracil(54)-C(5))-methyltransferase, metazoa typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45904TRNA (URACIL-5-)-METHYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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