| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s008.g0140.t1 | THUMP DOMAIN-CONTAINING | Lsat_scaffold008 | 2959590 | 2974394 | + |
| CDS | |||||
| Lsat_s008.g0140.t1 | |||||
| Transcript |
| Lsat_s008.g0140.t1 |
| Protein |
| Lsat_s008.g0140.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01170 | UPF0020 | Putative RNA methylase family UPF0020 | Domain | Interproscan |
| PF02926 | THUMP | THUMP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000241 | Domain | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain | Interproscan |
| IPR004114 | Domain | THUMP domain | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14911 | THUMP DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0016423 | Molecular Function | tRNA (guanine) methyltransferase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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