Detailed information of Lsat_s006.g0537.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s006.g0537.t1MATRIX PROTEIN, PUTATIVE-RELATEDLsat_scaffold0061356590113659019-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF16184Cadherin_3Cadherin-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001007DomainVWFC domainInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR006212RepeatFurin-like repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR039005RepeatCSPG repeatInterproscan
IPR051561FamilyFRAS1-related extracellular matrixInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45739MATRIX PROTEIN, PUTATIVE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP