Detailed information of Lsat_s003.g0580.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s003.g0580.t1SYNOVIAL SARCOMA, X MEMBERLsat_scaffold0031780767617928500+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001214DomainSET domainInterproscan
IPR003655DomainAncestral KRAB domainInterproscan
IPR006052DomainTumour necrosis factor domainInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR044417DomainPRDM7/PRDM9, PR/SET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14112SYNOVIAL SARCOMA, X MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP