| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s003.g0310.t1 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP | Lsat_scaffold003 | 10075147 | 10105725 | - |
| CDS | |||||
| Lsat_s003.g0310.t1 | |||||
| Transcript |
| Lsat_s003.g0310.t1 |
| Protein |
| Lsat_s003.g0310.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF01607 | CBM_14 | Chitin binding Peritrophin-A domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR002557 | Domain | Chitin binding domain | Interproscan |
| IPR008969 | Homologous_superfamily | Carboxypeptidase-like, regulatory domain superfamily | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR036508 | Homologous_superfamily | Chitin binding domain superfamily | Interproscan |
| IPR039675 | Family | Cartilage intermediate layer protein 1/2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15031 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0008061 | Molecular Function | chitin binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
