Detailed information of Lsat_s001.g0883.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s001.g0883.t1ENVOPLAKINLsat_scaffold0012308884623250374-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00681PlectinPlectin repeatRepeatInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF17902SH3_10SH3 domainDomainInterproscan
PF21020Spectrin_4Spectrin-like repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001101RepeatPlectin repeatInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR003108DomainGAR domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR035915Homologous_superfamilyPlakin repeat superfamilyInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR041615DomainDesmoplakin, SH3 domainInterproscan
IPR043197FamilyPlakinInterproscan
IPR049538RepeatPlectin-like, spectrin-like repeatInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23169ENVOPLAKINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005882Cellular Componentintermediate filamentInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042060Biological Processwound healingInterproscan
GO:0045104Biological Processintermediate filament cytoskeleton organizationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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