| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_029153-T1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 | scaffold_55 | 273922 | 333709 | + |
| CDS | |||||
| LLU|FUN_029153-T1 | |||||
| Transcript |
| LLU|FUN_029153-T1 |
| Protein |
| LLU|FUN_029153-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06650 | VPS13_VAB | Vacuolar-sorting associated protein 13, adaptor binding domain | Domain | Interproscan |
| PF16908 | VPS13_ext_chorein | Vacuolar sorting-associated protein 13, extended-chorein | Repeat | Interproscan |
| PF16910 | VPS13_mid_rpt | VPS13, central RBG modules | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009543 | Domain | Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain | Interproscan |
| IPR026847 | Family | Vacuolar protein sorting-associated protein 13 | Interproscan |
| IPR031642 | Domain | VPS13, middle RBG modules | Interproscan |
| IPR031646 | Domain | Vacuolar protein sorting-associated protein 13, extended chorein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16166 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006623 | Biological Process | protein targeting to vacuole | Interproscan |
| GO:0019898 | Cellular Component | extrinsic component of membrane | Interproscan |
| GO:0045053 | Biological Process | protein retention in Golgi apparatus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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