| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_028212-T1 | HSDA/SDA1-RELATED | scaffold_52 | 820080 | 833118 | + |
| CDS | |||||
| LLU|FUN_028212-T1 | |||||
| Transcript |
| LLU|FUN_028212-T1 |
| Protein |
| LLU|FUN_028212-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05285 | SDA1_dom | SDA1, conserved domain | Domain | Interproscan |
| PF08158 | SDA1_HEAT | SDA1, HEAT repeat | Repeat | Interproscan |
| PF21638 | SDA1_C | SDA1, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007949 | Domain | SDA1, middle domain | Interproscan |
| IPR012977 | Domain | SDA1, N-terminal | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR027312 | Family | Sda1 | Interproscan |
| IPR048292 | Domain | SDA1, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12730 | HSDA/SDA1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000055 | Biological Process | ribosomal large subunit export from nucleus | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0042273 | Biological Process | ribosomal large subunit biogenesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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