| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_013545-T1 | TENASCIN | scaffold_207 | 333758 | 361947 | + |
| CDS | |||||
| LLU|FUN_013545-T1 | |||||
| Transcript |
| LLU|FUN_013545-T1 |
| Protein |
| LLU|FUN_013545-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00040 | fn2 | Fibronectin type II domain | Domain | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF01390 | SEA | SEA domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000082 | Domain | SEA domain | Interproscan |
| IPR000562 | Domain | Fibronectin type II domain | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR013806 | Homologous_superfamily | Kringle-like fold | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036364 | Homologous_superfamily | SEA domain superfamily | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR036943 | Homologous_superfamily | Fibronectin type II domain superfamily | Interproscan |
| IPR050991 | Family | Extracellular Matrix Regulatory Proteins | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46708 | TENASCIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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