Gene detail

Detailed information of KAK2172818.1 in Ridgeia piscesae Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2172818.1	CYTOKINE RECEPTOR	ctg926_pilon	197360	221971	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2172818.1

ATGGTGCATCCGGTGAATCTACTGTCGACTGTCCTCGTCGTCGTAGTATTTGGCTCATATTCGGCAGCGAATACAGAGTTTAAACTGGGACAGAAAATCGGTGATGATGCAGAATTACGCTGCTGGTCGGCTGAAAAACACGAAGGTGTCCGGTTGACATGGATGAAACAGTACAATGACACATTCCAAATCCCAATTGTGAACCTTGCAAACACGACGGAAGTGAAGCATTTCAATGGAACAACATTGATGACGGCAGGGCCAGATGGCAGGTTGCAGATTACCAATGCCGTTGTTGCCGACTCTGGCAAATATGTCTGTCGAGGGTACATCAATTCACCAGATGGCGGAGAAAAACTTGTCTTCAGTGATTCATCAACTCTGACAGTTGGAAGCGTGCCAAAAAAAATCCCAGGCAAACCAGAGGTGGAGGTGGTCGATGCCAAATCACTGAAAGTAGAATGGCAGCCAGCGACATTGCCAGACGGGGAGATGAACCCAATCACTGGCTACAACATCCGGGTCAGCCAGCTACAGACCAATAACGGAGTTGAACACAAGAACACGACAATGTACACTTGGGAGAAGGCAATTACGAAGGCGGTTAATGAAACGCATAGTGCAGTGGTCAGCGGTCTGCGGCCATTCACCTTCTACATGGTCAGTGTGCAGGCCGTGAACGCAGTTGGCGAGAGTGAGCGCAGCACTCCATCGGATGTCCACCAGACATGGGAAGCAGCCCCTGAGGGTGAGCCGCATGTCAAGCTTGGTGTGAAGAACTACACTCGGGCCGTCTACCTGGAGCTGTTGCGCCCTGACCCCCTTCTGCTCAACGGCAACCTGACAGGCTATCACTACCTCTATAGGGCGAAGGGGGCACGCAGTACGATCTCTAGGAACATCCCGGCAAATGGCACGGCAAACAGCACGCCGCTGAACATCACAGACCTGAAGCCATTCACAACATACATCATCAAGCTGAGATACCTCAACAAGCGCGGTGAGGGACCGTGGGCAGTGGTCAATGTGACCACCCTGGAAGGAGTGCCAGGCCAGCCAAAGATTACAAACGTGCGCAACCAGACCCACAATTCCCTGCAGGTGGTGTGGCAGGAGCCGCCCACGATCAATGGCATCCTGACAGGCTACAGCTTGTCCTACCACCACAACGGCACCACGCAGTATGAGTCCTACGCAGTCAACGAACGCACATCGGTTGTTACGCGCACAATCACAAACCTGAAACCATACACGAGGTACGACCTTCGCGTGGCGGCTCGTACCCGAGTTGGTCTAGGTAAATACAGTGATGTCCACCCCGGGTATACGGATGTCGAAGGTCCCAGTGCACCGGATACGGTCAACTTGACCGCTGAAGATTCAAACAGTATCCTGGTGAGCTGGTCAAGACCAGTGATCTACTGTAGCCAGATAGATCAGTACCGTGTGAAATATTGGCGCAATGACACGGCTGAGGAAAAACATACAATGATACTTCCAGTCGCCAATATGGACACTGACCGGCACAGGGCCATGATCAAAAACCTTGAGGCGAACCACTTGTACATAGTGCAGGTTGCCGGGGCAACAAAGAGCATATTTGAGAAGAACCCACAGTATATCTTCGGGAAGTATTCTGAGCCAAAGACAATCTCTCTGAAAGGTGTTGTCATCACAAGTTATCCGCCAACCACCATCGCTCCGGAGCATTACACCATTGGCTACATCGCAGGCGCCATGGCAACCGTTCTAATCATCGTCATCGTCATTGTCATATTCATTGTGACCAGACGGACGAGGTATCAGTTCCTCCCGGGGAATGCTGACGGGAACCACATGACTCCCAACGCCAACAACATCTCCATGCCAGAAGCCTACATTGTGGATGAGCAGCGGTCAGTGAGTGTGGAGAAGTGGGCCGCCCACGTCACCAAGTTACACGCTGACAGCAATTGTGGCTTTGCACAGGAGTACGAACCAAACACTCTGCCTGCCTCAGAGAACGAACGCAAGAATCGCTACCTCAACATTGTCGCTTATGACAATACCCGGGTTGTCCTCAGGCCGCTGGCGGGAAAGTCTCGCCACACAGACTACATCAATGCAAACCACATTGATCACAGTGGTGCCACAACTAGAGCCATCGGGTTCTCGTTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATGTCTTAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCAGAGATCTCATTGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCAAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCGAGAGATCTCATTCAAGAGATCTCATTCTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF07686	V-set	Immunoglobulin V-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013106	Domain	Immunoglobulin V-set domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-