Detailed information of KAK2164927.1 in Paralvinella palmiformis Gene info
Gene IDAnnotationContigStartEndStrand
KAK2164927.1ATAXIN 2-RELATEDctg57_pilon132908159690-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan
PF06741LsmADLsmAD domainDomainInterproscan
PF07145PAM2Ataxin-2 C-terminal regionMotifInterproscan
PF14438SM-ATXAtaxin 2 SM domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000634Binding_siteSerine/threonine dehydratase, pyridoxal-phosphate-binding siteInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR009604DomainLsmAD domainInterproscan
IPR009818DomainAtaxin-2, C-terminalInterproscan
IPR025852DomainAtaxin 2, SM domainInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR045117FamilyAtaxin2-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12854ATAXIN 2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0034063Biological Processstress granule assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP