Gene detail

Detailed information of KAK2163793.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2163793.1	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	ctg74_pilon	969442	991389	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2163793.1

ATGGCGAAACACTGGCTGTTGGCGGCATCGGGCAGGTGGCGGTTCCAGACGGGTCAGTTTGAATGGGATTTGCATCGGGACTTTGAAAAAGTGGCCTTTAGAGCAGATTTATTCTTTGTCGCAACCTCGGAATTCATACGGTACTTCAACATGTCAGATCCGGATGATCCAGGTAGCTACATTCCTTTGGAAAATTTGCATACTCCAGTCGCCATAGATTACGATCCAGTGGAAGATTACGTGTACTGGACAGATGTAGGTCGTAAAACGATATCGAGGGCGAGGAGTAATGGTGACGGACAACAAGTTCTTCACAATGGTGTAGTGTCGGCGGACGGATTAACGTTGGATCTCGATTCTAGGATGATGTATTGGACATCTTCCGGCAACGATACGATAGAAAGATCAACACTGGATGGGAATGATAGGAAGATACTGATCAACACAGAGATAGAAGAACCAAGGGCCATTTTACTGCACAAACAACAAAACAAGATGTATTGGACGGACTGGGGCCCGAGCATTCGTCGAATACAGCGAGCTAACTTAGATGGTTCCGACAGAGAGGTATTGGTCAATACAACGTTGATGAACCCGTTTGGCCTCGCCCTAGATATACCCCGCCAGAGGATGTACTGGGCCGAGGCTTGGCTCGACAACTTCGAGTCGTCTGCTCTGGATGGAGATGATAGACAGCTGATATACCACGAAGATGGAGTGAATCCTTTCTCCATAGCATTGCGCGATATTCTGCTGGTTGGTGATATTCACGAAATAAGACAGGTAAATCTCGATGTGGAGAAGCACCTGGGAGAGGTAATTAGCGCCACATTAAAGGACCCGGTTCCGTTAGCCATAGATTATGACCCTAACAAGGACATTATCTACTGGTGTGACATACTATCGAAGAGTATTCGTAGCGTACACAGGGATGGCTCAGGATTGTCCTCTAATGACAACAAACCATTCTGGAAATACGTTAAAGCAAAACGACAAGATTCTGTCGGATTAGCATCTATCATTGACAAAGGCACACTTCACACTAGTAGCCAAGCTATGGCAGGTATATTAAACGAACAATTTAAGTCGGTGTTTACCAAAGGGGGTGATACTACCAACATCCCTGCCCTGGAAGCTGGCCAATATCCGGATATACCACGGCTGTCCATTGACGTGCATGGCACGCACAAACTACTTAACCAAAGCCTCGGGCCCGGACGTGCTGCCCAACGGGGTACTCAAAGAATTTGGGCAATCGGTGAGCTTGCTCTTGTAACAGAAAACGTTACCTATCCCGCATCCTTAGCTCTAAGCTGGGAAACCAATGAGTTATTTTGGGCAGATAGCGAGATACGCGTCATCGAGAAGTTAGACCTCTCTACAAACAAGAGAACTATCATTATTCACACTACGTTGTTGACTCCACGAGGAATAGCCTTACACAAGTCAAATAAAACCGTTTACTGGACGGATGCCACGTTAGGGTGGATACAGCGAGCATCATACGACGGTGAAGATCGTGAGACAGTTATCGGTGGACTGGAAACGCCTACTGCCATTGTACTTGACATAGAGAATGACTTTATGTACTGGAACGAGTATGGCGCTTCAAAGATCATGATAGCGAGCCTTAATGGAAAGAACGCCAGGAAGCTGGCGTCGCCTATAAACTCACTATCTATGACGATATTAGGAAGTTACATTTATTGGACGGATAACAATAAGAATTTCACTGGTAGAGCAAACAGGTACACCGGAAAAGATTTTTCTGTTGTTTTGATGCGAGAGAGATTTATGGGCATCAGAATATTAGAAGGTATAATTGACTGTAGTCATTCACCTTGTATCAATGGTGGATCTTGTACTGACAACATTAATGGTCACACCTGTCAGTGTGTGGAAGGATTTACTGGCAAAAACTGTCAAACAGATATTGATGATTGTGGGAGTGACCCTTGTCAAAACCGAGGCACCTGTGTCGATCAAATCAATGAGTACGTCTGTATATGTGGACCAAAGTTTACTGGAAAACACTGTGAAAAGGTTATGAATCCTTGTACGAGTTCTCCATGCTGGCATAATGGTGTCTGTGGCGTCACTGACAACAAGATTGTATGTTCCTGCCGGGATGGATGGTTTGGAGATATATGTCAGTTTGATTCCCTGATGATTGACACAATCTCACCACAAGTAGGTCCGGTCGCTGGAGGAACCAATATCACTATAAGTGGTATATATTTCCCGTCATCTGGTGCCCAGGTCACAATAGGCTCCATAGCTCGCTGCAGGACGCTGTCTTCGAATATTACGACAATTATTGCGATGACTCCATCGGTGAATGGCATACACAGTGAGAAGGAGAACCAAATATCTATTTCGTTTCCGGGGAGAAAATTAGATTTCTCCACGAGCTACATCTTCGTGTATAAGGCCAATCCATCAGTTACCTCGGTATATCCCCTGGAAACGATAAACAGGGGTGGCACAAGACTGACAGTAACCGGAAATAATTTTGATGCCGTGGAGAAGCCAGTCCTGAAAGTTGACAAAGTAGATCAAATGGTTTCTGTGTCTGGTACCAGCGTATCGGTAATTAACGAGACTATCGTCACATACTATGAGGATTGTACCAGCGCGACGAAGATTAAGTTAATCTGTATAACGCCAGATATCGATATTTCTGATACAATGATCTTCACAGATGACAGTATCAGTGGTGAGAGAAAGCGGAGAGATCTAACTGATCAACAGGTCCGTGTTAGACAAAAGAGGGAGGTGCGCATTGAAATCAGACATCGGCTCTACATCGGGATCATCCTAGATGGCGTTGGCAAATTTGAAAATCTGTCGGCCAATGTCGATACGAGAAACTACGGTCGGCTATCTGTCACAAGTACTCCGGAGTTCCATGGATCATCGGAAGACGAAGTGTTTAAGTTCACTTCTGGACAACCGATTGGCATAAAGGGCAAGAATATCGATCGACTGTCAAGAGAAGATTATAGAGTAGATATAAGTAGTGGACAGTGCCAGATCTTAGAGATAACTGACAACAAATTGCAATGTATGCCGCCACAAAAAGAGCCACCAAAGGACAAAAGGTCATCTTCAAAAGGACATCTGATTCTGGTATGCTCTAAGCACTTTGCAGCCTCGCTGGTTTGTCGAGCAATTAGAGATGCTTACTTGAATACATTCCGCAAACCTGAACAGTTCCCAGAGGGAACACCAAACTTATCTAACTATCCAACGATACACGTTGGCACCAGAATCAAGGAACCGGTCGGTTATTTGAAGTATCCCTTTCAGATGATTCTTTATATCGGTATAGGTGTATCTTCCGTTGTCGTCATAATCGCTATGATCGTTATAGTTGTGATATGTGTTCGACGAAAGTCTGCTAAACGGCGAAGTAACGAAGAACGTCAACAGATAGGTGATGGGAGAGATGTATCTGCTATAGAACTACCGCCGGTGGATGCGCGATCCGTCATGGGATTTTCAGCCTTCAACACCTCCATCTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF01833	TIG	IPT/TIG domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002909	Domain	IPT domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-