Gene detail

Detailed information of KAK2162672.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2162672.1	XANTHINE DEHYDROGENASE	ctg94_pilon	663910	684517	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2162672.1

ATGTTAACGTTTAGTTTTAAAATTTCAGATCATAAATATAATAGCCTCCGAACGTTTATCCAGGTGCTACACGAATTTGCTGCATTACAGTTAAAGAACATGGTGACAATAGGAGGTTGTATCGCCTCAGCGTGGTCCAACTCAGACGTTATACCACTATTTTGTGCTCTTGGTGGTATTGTCCAGCTGGCATCTTCTGGTAATCCATCTAAATCAATTGTAGTTGATGAGTGTTTCTTCAAAGGCCCCGGGACAACAATTATTGCTGATGACGAAGTAATTCTGTCTGTAACCTTGACATTCCTGAACAAGTTAATATTGTTTGATAGATGTTGTGAGACAAGTCTGACGTCAGATGCTTTGAGTTGTTTACAAGATGACTTCTTGGTCGTTGAGAGACTGAGTAAGGAGAAGCTGGGAGCTGATGTGAAGTCATTGACTGAAGCTACGATTTGGACACTGATGATGAAGATAATGTGTGATGTCCATGGAGATGATTTCATACCTGTTGAAGAACGACAGGTGATTTATCCCCTGGACAGGAGCTATATCGAGGAAGTACCAGCAGATCATCCAGAAAGTGATGGCGTAGGACGTCCTATTGTACACAGATCTGCTAGACAGCAAGCTACCGGAGAAGCTTTATACGTTGATGACACTCCTCACTATGAAAATGAGTTTTACCTGAGTTTGGTGACAAGTAAATATGGACACGCACGTATCCTGAAAGTGGATCCTTCTGAAGCTCTCCGAGTCACTGGAGTTGTGGATGTGTTAACTCACAAGGCCATTCCCGGTAAAAACCAGTACGGACGGATTAAACCAGATGAGGTTTTGTTTGCCGTTGAAGAAGAAGCCATCAAAGCAGACTCTTACTTTGAAGACAGCAAGACATTACGGATTGGAGACACCGAATCTGGATTCAAAGAAGCGGATGAGATTATCCAAGGAGAGATTGAGATCGGCGGCCAGGAACATTTCTATATGGAGACAACACGTGCCCTTATTGTGCCATCAAAAGAAGATAGTCAGTTAACTGTCTTTGCACCAGTCCAGAGTGCAGACTTTTTGCAAGAAACTATTTCCAGTGTATTAGACATACCATATTCCATGATCGGAGTACATACCAAAAGAATAGGTGGCGCCTTTGGAGGAAAGGAGACGAAGATTCTCGTTGTCTTGCCAGTGGCTGTAGCTGCCCATAGGTTGAGGCGGCCAGTTCGTTGTGTTCTGGACAGGGATACCGACATGCAAATTACAGGTGGAAGACATCCTGTACTGGCTCAATACAAGGTTGGTGTTAAGAAATCTGGATTGATCACGGCCCTGGAGTTGACGGTTTATCTTAATGCTGGCTGTACAACTGATTTATCCCCAGCAGTTTTGGAAGTTTTACTTCTGGGTTTTGATAATTGTTATCAAATCCGAAATGTTCAAATCAATGGCAGAATCTGTAAGACCAATCTTCCATCGAACACTGCGATGAGAGGATTTGGCAATCCTCAAGCGATATGTATTGTTGAAACGTGGTTGCAGCAAGTGGCTGAGAGATTAGGTCTAAATCCAGAACAGGTTCGTAAGCTTAATATGTACAAAAGCGGTGAGAAGCTTCCCTTTAATAGTAGCCCAGAAACATCTACTTTTGAGAGAACGTGGAATGAAGTCAAGGTCAATAAGTACAGAAAGAGAGGTATTCATGTTGGTCCACTGAAGTATGGATTGCATTATCTAGAATCCGTAAGATATCAGATTGCCAGCAGAGTTCTGGATGTACCAGTTGAACATATTCATATTAATGGCACAGATACCAACATTGTTCCAAATGCTATCGTCAGTAGTGCAAGCTTCACTTCTTTGTCGAATGGCGCTGCAGTCATGGATGCATGTCAGCAGTTGAAAAAGAGGATAAAGCCATACAAAGATGCCAACCCTAATGGCACCATGACTGATTGGGTAACAGCTGCCTACCTTGATCGAGTGAGCTTGTCAGCAACAGGAATTTATAGACCAGATATGCCTAATTTTGGTTATGACTGGCAGACAGGTGAAGGAAGAACCTGGCATTATTACACTTCTGGTGCAGCTTGCTCTGAGGTTGAAGTGGACATAATTACAGGACAACACGTGGGTTATGGTCTGTATACAATGGAAGAATTGAAGTTTGATACAAACGGCCAGCTTACGACGATAAATGCCATGGGATATAAGATACCACGTGTTACTAATGTTCCAAGACAATTTAATGTAACTCTTCTGAAGGACTCTGGTAATCCTCATGGTGTATATTCTGCCAAGGGTATTGGAGAACCACCTCTGTTGTTGGCCCATACCGTGGCTCTGGCGATAAGAGAGACGATAAAAGCCTACAGGAAAGACATTAACCAAAATGATTACTTCCAACTGAATTATCCAGTTACACCTGATCAGATCAGAGCTCTCTGTCCAAAATAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00941	FAD_binding_5	FAD binding domain in molybdopterin dehydrogenase	Family	Interproscan
PF01315	Ald_Xan_dh_C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	Domain	Interproscan
PF02738	MoCoBD_1	Molybdopterin cofactor-binding domain	Domain	Interproscan
PF20256	MoCoBD_2	Molybdopterin cofactor-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000674	Domain	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead	Interproscan
IPR002346	Domain	Molybdopterin dehydrogenase, FAD-binding	Interproscan
IPR008274	Domain	Aldehyde oxidase/xanthine dehydrogenase, first molybdopterin binding domain	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR016208	Family	Aldehyde oxidase/xanthine dehydrogenase-like	Interproscan
IPR022407	Binding_site	Oxidoreductase, molybdopterin binding site	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR036856	Homologous_superfamily	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily	Interproscan
IPR037165	Homologous_superfamily	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily	Interproscan
IPR046867	Domain	Aldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11908	XANTHINE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0043546	Molecular Function	molybdopterin cofactor binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-