Gene detail

Detailed information of KAK2152313.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2152313.1	ANAPHASE-PROMOTING COMPLEX SUBUNIT 5	ctg332_pilon	392488	404166	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2152313.1

ATGACGGATTTAATTAATCTAGGAATGCATACTAAGCGAGCTTTAAAAGATCAAGTGACACCGTATAAAATAGCATTACTTGTTTTGATAGAAGAGTATTGCAAAACTATTGGCCAATCAACATCAAAACCTGATGAGGTGTTAAATGAACGAGAAGAGCGAGAACTTCTTATCGGGATGCTACACCTGGTACAAGGTTCTGACTTGGAGCTGTCGGATCTCTCCTTAAAGTTGAAGCTTATTGTGAAGAACTCGCTGTTTGAGAGTATTACAGTACGTCTAACTGAGTTAAATCAAAATGGCATCAGCGTAATCATGGACCTGTTCCAGACAGTATCAGAAAGTCTTTTTGAAACGTCACAGGCATTACACAGAAACAGTGTCTTGGCCTTGTTTGTTAGACGGATGCAGCTTGCTTTTGACAAGCTCTCATTTAATCAGGTAACAAAGCTGTATAATAAATATAAAGTCTACTTTTCAAGTTGGCATCAGGACCACAAGAATCATGGAGAGTTAGACAGTGGAAATCTGACAGATATGTCTATTAGTATCATGGAGATAGCTGGAAATCTAGACAACAGTGAGAGGAATGCCGATGGCGCTGATCTGCTAGAACCGGGAAAATATTCCCAGCGTCAGGCTGAGTTCTTTATTGCGAAACAGGCTTCGCTGCTTCAGCACAATCAGCTTGAAGCACTGAGCCCTAAAGAGCTGCAGCAGAGGATCTCTGACTTGCTGCGAAGCAATCCTGATTTAGCTGAGGCACATTATCTCAGCTACATGAACTGCCTTCGTATAAACGAATATTGTGCAGCAATGGACAGTCTGTATCACTACTATGACAGGCATCAGTCAGTTGGCAGCAATGGGAGATGTTTTTCCAGCATCACGAAGCCAAAATTGGAAGAAACAATGCAGAGCAAGAACCTTCATTATGCAGCACTGAATTTGGCATCCCTCCACTATCGGTTTGGTCACCATTTGGAAGCTCTGGCTGCAGTGCAAGAAGCGATAACGATAGCTCAGGAATCTAATGATCACGTCTGTCTGCAGCATGCGCTTAGCTGGCTGCAGAGACTCGGTGTACGAGGCACTGACAATGTAGTCCTTGAACGTCTCATCACCAAAGCCACAGAGATTAACCTGCCCTATCTGTTGTCACTCGGCGTACAGACAATTGCCAAGCACCGGGCGCTCACCAAAGTAGAGCCATCGGAAGTTTTTGAGTTACTGCTGAGAAGTGATATCATCAACTGCCAACATTCGCAGTCAGATCTCATGGTGACCAGTTATGCTCAGAAGGCGGCTCTTTGGTATCTGTATGGGAACACTGAGATGTGCTCAATGAACAGTCAGTTGATGTTACACTTAAACACATCAGACCAAGGCGTCTTCCACAATGGCGAAGCAGAGTGCATCGCACTCTGTCAGTTGGCTCGACTGCACGCTGATAAAGGTGACTACGATTTGGCTTTCGATATCCTCGACTCGGCTAAGCACAGGTTCCCGCACAACTCGGAGCATGCGCTGATATGGCAGCTGTACTCCCAGCTGATGTCATTCACCAGGTTTTTGCATCAGGGAGACTGGACGAAGGCAGAAAAGGCAATAACAAACATGACTTCAATTAGCAGCTTGGAGGCCAGTTACTGCCGATGTGTGTTGCTGAAGGAGAAGGCCGAAGTGAGTTCGGCCATCAGCTTAGTTCAGATATTGATGACCAGGTGTAATGAGAAGGCAAAACAACATCAAGAGGAGCCGGAGCTCTATTCAAGACTCCGGCTTCTCCAGGGAGAGCTCTACTGCATGATTGCAAACCCAACCTTAGCAGTACAGCCTCTGTTAACCTGCATCACACTCTGCAGAGAACATCATTTTTCTTACACAGCAACCATTGCCACACTGCAGTTAGCCTTCGTTCAGTACAATCTGGGTATGCCTAGCCAGGCATTGACACTAATAGAAGGCATACTCTGCACTATTCTTACCAATGGCACCCTATTTGACCGTGCTCGTGCACACTTCCTGTGGGTGAAGTGTCGTGTAGCTGCAACCAACCCCACGAATAAAAAGCACAGAAAAGAAGTGATGTTACAGTGTGTGCCAATTCTGAACAATGCCATCACCTGGTTTAAGAGAGTACAGTGTTACTCCAGAGTGCAGTTAGCCGTTTATTATGTTGCTCGTCTTTATCATGAGTTGGACAACCATGCGGAGAGGAACAGGGCAGCTTTTGAACTAAAACAGCTTCGTCAGCAACATCCCAATAACTCTGCTGTGGTAGTTAACTTATTGTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12862	ANAPC5	Anaphase-promoting complex subunit 5	Repeat	Interproscan
PF21371	Apc5_N	Anaphase-promoting complex subunit 5, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR026000	Domain	Anaphase-promoting complex subunit 5 domain	Interproscan
IPR037679	Family	Anaphase-promoting complex subunit 5	Interproscan
IPR048968	Domain	Anaphase-promoting complex subunit 5, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12830	ANAPHASE-PROMOTING COMPLEX SUBUNIT 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0031145	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0045842	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan
GO:0070979	Biological Process	protein K11-linked ubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-