Detailed information of KAK2146800.1 in Paralvinella palmiformis Gene info
Gene IDAnnotationContigStartEndStrand
KAK2146800.1DIAMINOPIMELATE DECARBOXYLASEctg583_pilon195747198750+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan
PF02195ParBcParB/Sulfiredoxin domainFamilyInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF17762HTH_ParBHTH domain found in ParB proteinDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002986FamilyDiaminopimelate decarboxylase, LysAInterproscan
IPR003115DomainParB/SulfiredoxinInterproscan
IPR004437DomainParB/RepB/Spo0J partition proteinInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR022657Conserved_siteOrn/DAP/Arg decarboxylase 2, conserved siteInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR036086Homologous_superfamilyParB/Sulfiredoxin superfamilyInterproscan
IPR041468DomainParB/Spo0J, HTH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43727DIAMINOPIMELATE DECARBOXYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008836Molecular Functiondiaminopimelate decarboxylase activityInterproscan
GO:0009089Biological Processlysine biosynthetic process via diaminopimelateInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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