Gene detail

Detailed information of KAK2144009.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2144009.1	AMINO ACID IMPORT ATP-BINDING PROTEIN	ctg793_pilon	92030	94741	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2144009.1

ATGTCGATTAAATCAGAATCAAAGATAAAGAAAAGATATACCTTGCAAAAGAAATCTTATCCTACACCTCTCATCATACCTACATGGAAAGCTGCTTTCTTTAAAAGCAAAAAGAAGGCAAATGTTTTCTCAAAACACTATCAGAAATTTGCTCCCATTACTGCAAAGGCTACACATATAGGATTACCAATACGTAAAAAAATGGATAATTTATCTCCCATTGTATATCGTCTTGGAGATGGAGAAATAATAAAAGTTCTTAATCGTAGTGAGAAAGAAGTAAACTTATCTGGGTTTAAAGATTATTGGTATTATGTACTAACCATTGATGGTACAAAGGGATGGGCATTTGGATACTATCTAAAGATACTTAATCCAAATATCATAACAAATATAAATCAAAGAAAATCTGATATACGTTCTCTTATTAATATGCACCCTGTGTGGTATCCAGAATACTTTTATACCATGGTACGAGATCATCAAATAGACCTATCTCGTTTTAAAGAGACATATGGATTCTTTCCTTATCCTAAAGAACATTATTTTCTCCTCCGTCTTCCTAAAATAGAAAAATCATTCCCATACGAAGCACTGATAAATCTTGGAGAAAATCGGATAGGAACACCAGACTTGAGACTTGAGCTGGAACTCTTGGGAAAAAACAAGTTATCGGTATTCTTCATTGAAGATGGGAAAACGCAACGTAGAATATTCTCTGGAGTTGCAATAAATGTGAAAGAACTAACAGAGCAGGAGATCAAACGAAGGAATGCACAATTTAAAGATCTTCTCGATTTGGCAGAGAGAAAAGGATTATATGATTTCTTTGATCAGGAACAGGCCGAAATATATTGTTTACAAGAAACAAAAGCACACCCAGATCAACTACAAGAGATATTTCTCAATAGAAGACCATACCATTCATACTGGAGCAGTGCAGAAAAGAAAGGGTACAGCGGCGTTGCAGTATATAGTAAATTAGAGCCTCTCCATGTGCGTGAAGTGGACGAAAAGAATTTTCAAAGAGAGGGAAGGGCTCTTATTATCGAATATCCACAGTTTACCCTTATTAATGCCTACTTCCCCAACAGTCAAGAAGGAGGAAAACGTCTTTCATATAAACTTGCTTTCTGCTCCTATATATTAGATTTCTGTCTTTCGCTGGAGAAAGACCACCAGTCCTTTCTTTTATGCGGCGACTTCAACATCGCACATAAAGCTATTGATCTTGCTCGACCAGAAGACAATGAAAACAATCCTGGATATCTTCCCGAAGAACGTACATGGATGGATCGCTTTATTGATAGCGGATTTATAGACACCTTTCGATATTATGCAATGCAAATACATATACAACATCTTTGGAAACGATTCGGATCGCATGATGTTCTAAAAGATATCTGTTTGAAAAAAGATGATATTCACGCACTGGTTCTTATAGGACCTTCGGGAAGTGGAAAAACTACGTTACTTCGCTGTTTGTCTGGTCTCATTCAACCCGACCAAGGAAGCGTGAGCATAAACAACACGAAACTACCCTCAGATGAAGAAGCTCTTAGAGATTACAGAAAACATGTTGGTATGGTATTTCAATCTTATAACCTCTTTCCCCACTTAAGTGCATTGCAAAACATCCTATTACCCTTAGAAAAAGTACATGGCAAGACATATGATGAAGCAATGGAAATTGCCCAACGTATGTTAAAACGTTTCAGGCTAGAAGAACAAGCACATAAGAAGCCTTATCAATTATCAGGAGGCCAGCAACAGAGGATTGCGTTATCACGCAGCATTGCCATTGCACCAGAATTTCTAGTACTTGATGAGCCGACATCTGCACTCGATCCTGAACTTACGGTGGAAGTACTTGATATGATAAAAGAACTAAGACAAGAAGATATTCATTTAATATTGGCTACCCATCATATGGGGTTTGTCACACATGTAGCTGATTATATCTGTTTTTTAGAAGATGGCCGATTAGCAACTCACGGCCATGCTCAGGAAATACTTAAAAGCAGTGAACACCCAAGTGTACAAAATTTCCTCACACAAGTTTTAAAATATTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR004808	Family	AP endonuclease 1	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR050086	Family	Methionine Import ATP-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43166	AMINO ACID IMPORT ATP-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-