Gene detail

Detailed information of KAK2141481.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2141481.1	CTP SYNTHASE	ctg1091_pilon	3911	6784	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2141481.1

ATGAGGAAGTATATTTTTGTTACAGGAGGTGTATGTTCCAGTTTAGGAAAGGGATTAGCTGCAGCTTCCATTGCTTCTCTTCTGGAAGAGCATAATTACCGTATATGCATGATTAAGATAGACCCATATCTTAACGTTGATGCAGGAACAATGAATCCATATCAGCATGGGGAAGTCTATGTGACTGATGATGGTGCAGAGACAGACCTTGATCTTGGGAATTATGAGCGTTTTACAAAGTCAATCATAGGTAAAGAAAACTCGATTACCACAGGACAAGTGTACCAAACTGTGATTCGCAAGGAACGAGAGGGACGTTTTCTGGGGCATACTGTGCAGGTCATTCCTCATATAACGGATGAAATCAAACATAGGATAGAATTTTGTTCTGATAAATCAAAAGCACATGTGGTAGTAATAGAAGTTGGTGGTACGGTAGGCGATATTGAATCATTACCCTTTCTTGAAGCATTGCGTCAGATCGAATTGGAGGTAGGGAAGGATAACGTGCTTTCTGTTCACCTTGTATTACTTCCTACGCTTGCCAATCATGAGCTAAAAACGAAACCTGCTCAACATGCAGTTAAACTGCTTCGTGAATCTGGCATACATCCAGATATACTGCTTTGCCGTTCACAATTACCTGTGCAATCTGCATTGTTGGATAAAATTGCCATGTTAACAAGTGTCGATACTAAAGCGGTAATATCAGCACATGATGTAAAGGATACCTTGTATGAAATTCCTTTAAATTTCCACAAACAATTTCTTGATCACATTGTTTTAGAAAAACTATCTCTAGAGATAAAAAAGAATATAAATTTACAATTTTGGAAACATTTTACTAAGGTTTTCCGCGATAAAAAAAATGTGGTACGTATTGCGTTACTTGGTAAATATGTAGGACAAAGTGATACATATCGCTCGGTGGAAGAAGCTCTTTTGCATGCAGCTATTGTAAATGATCATTCATTACAGGTAATTTCTATTAATGCGGAAGACATATATAGTGATCCTCAACACTATTTAAAAGATGTGGATGGCGTGTTGGCACCAGGGGGATTTGGCGAACGAGGGATAGAGGGGCTCATTCAAGGTATTCAGTATGTGCGCGAACAAGATATTCCTTTTCTAGGCATTTGTTTGGGAATGCAAAGTATGGTTATCGAATATGCCCGGAACGTATTAGGTATGGATGGTGCACATAGCACCGAGTTTGATGCGAACACTGACTATCCTGTAGTAAGTTTGCTGGAAGAACAAGTTGGACAAAAAATATACGGGGGAACAATGCGATTAGGGCTATGGAAGGCGCATTTGCTTCCTGGCAGCAAATTGGAAGCAATATACGGAAAAAAAGAAATAACTGAACGTCACCGCCACCGATACGAATTTTCTGATGCTTACAGAGAAAAACTTCACTCGCAAGGTCTTGTCGTATCTGCCGAAACAGAAGATGTGCAGCTTGTCGAAGTTGTGGAATGGAAGTATAATACATGGGGTGCTACGGGTGACCGAACACTGAAAACCGAATCTGATAAGAGTGCGCCTGAGTTTGTGTTAAATGAAGCTAAAATAACTATCATAGAAGATGATTTAACGACTATAGAGGTTAAAGAACTTGCATATTTTCCCGTTGACGGTAGGCAGGAGTTTAAGAATGTAAGATTTATCCAACGAGCCACTGAAGGAAAGGTAAAAATGAAAGGAAATGCGCAACGCCTTGTGATGTATCAAAATAAAGATATCCTTATGGAAGGAGATGTAACATTTCTTGATAAAAAGAAGGGGCTTTATCTTACCTCTATTACCCTTTTTTATGATAGAAAGGAATCGCGAGCAAAGGCAAAAGGAAATGTGATAATGGAAGATAGGAAGAACAAGCTATCTGCGCATGCGGTTTCTGTGGAGATGAGTGATGGAGGAGCGCGGATTGTAATGCAGGCAAGAGTGCGTATTGTGAGAAATAACACAGTAATACGTAGTGAATTAGCTGTTTACGATAGAACTGCTCAGCAACTGTATCTTAGTGGATTTCCTCGTGTTGTCCAAGGAGATGATATCTATGAAGCCTTGGAAATCACATTGAATCTAAAAACGAAAGAAGTCCGATTGAAAGGAGCAGTACAAGGAAGCATCAGGGCAAAAAAGAAAAAAGATAAGAAACAGGAAGTTCAGAACCCATGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF06418	CTP_synth_N	CTP synthase N-terminus	Domain	Interproscan
PF06835	LptC	Lipopolysaccharide-assembly, LptC-related	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004468	Family	CTP synthase	Interproscan
IPR010664	Family	Lipopolysaccharide assembly, LptC-related	Interproscan
IPR017456	Domain	CTP synthase, N-terminal	Interproscan
IPR017926	Domain	Glutamine amidotransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR033828	Domain	CTP synthase GATase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11550	CTP SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003883	Molecular Function	CTP synthase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006221	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0006241	Biological Process	CTP biosynthetic process	Interproscan
GO:0019856	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0042802	Molecular Function	identical protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-