Gene detail

Detailed information of KAJ8418722.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8418722.1	PHENYLALANYL-TRNA SYNTHETASE	AAFF_1.1_unplaced_1	7587487	7699439	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00002210

ATGCGAGATCTGCTGATGACTGCGTGGGTAACGGTGCCACGGCCTGCTTGCCAGCGGAAGGGAGTGGGCACCTGCCGCTTGCCTAAGGCAGGGGCTGCCCTGGCTGGTGCCCAGCCTGACCTCTCCATGGGCACCCGGGCATCTCCCCTTTCAATTTCCTGCGGCAGGAGCCAGAGGACTCAGCTCAAGCAGgtTGATGGACCGAGTACCATGAGGCCGTGCTGCAAAGCCCGCCCCCTGTTGCTCCTCCCCCTGTTGAAGGCGGCCTTCCTGAATGGACAGCTCACCAGTGTCAGGGCCAACCATTGGCTATCGACTCACAGACTCCTCCCTGCCAGAGGGCTGACCACTGAAGGCCCGGCATCCCACCCCGTGGAAGTACTGGGGCAACTCTTCCGCCGCGACGACTTTACCAACGTCACGGCCAAGATCCTCTCTAAAGTGGGGTGCAACCTGCACAACCGTACCCACCACCCATTGTGGCTCATCAAGGAGCGCATCAAGGCCCATTTCTACCGGACCTACATGGGTCGTTGGGGCACTCCCCTCTTCTCCGTCCACGATAACCTGAGCCCCGTGGTGACGGTGGAGCAGAACTTTGACAGTCTCCTCATCCCCCTGGACCATGCCAGCAGGAAGAAGGGCGATAATTACTACCTGAACCGGGGCCACATGTTGCGGGCACACACGTCGGCCCATCAGTGCGACCTGGTGCGCTGCGGGCTGGACGCCTTCCTAGTGGCCGGAGATGTGTACCGGCGGGATGAGATCGACGCCAGCCACTACCCTGTCTTTCACCAGATGGAGGGCGTCCGGTTGTTCTCCAGCCACGAGCTGTTTGCGCAGGTAGAGCGGGGCGAGGACCTGCGCCTGTTCGAGAGCAGGGGCCGCCGGACCCCTCAGAAGCAGGGGACGCACACGCTGGAGGCCGTCAAGCTGGTGGAGTTCAGCCTGAAGCAGACCCTCACCCGTCTCGTCAGACATCTGTTCGGGGAAGATCTGGAGATTCGCTGGGCAGAGTGTTACTTCCCCTTCACCCACCCCTCTTATGAGATGGAGGTGCGTTTCCAGGGCGACTGGCTGGAGGTGCTGGGCTGTGGAGTGATGGAACAGGAGCTGGTCCACTCAGCTGGGGCAGAGAACAAGATCGGCTGGGCATTTGGGCTGGGCTTGGAGAGGCTGGCCATGGTTCTGTATGGGATCCCAGACATCCGTCTGttctggagcgaggatgagCGCTTCCTCAAACAGTTCTGCCTGCCCCACATTGATGATGCCGTCACCTTCCAGCCTCTCAGTAGATACCCTCCCTTGATGAATGACATATCCTTCTGGCTGCCGGCTGGAAGCTACGCTGCGAATGACTTCTACGACCTTGTGAGAAGTATTGGTGGGGACCTGGTGGAGAGAGTATCCCTTGTTGACCAGTTCACTCATCCAAAGACAGAGAGGGTCAGTCACTGCTACCGCATCACATACCGCCACATGGAGAGGACTCTGACCCAGCAGGAGGTGCGGGTCATCCACCAGTCCATTGAGAGAGCAGCGGAACAGGAGCTGGGGGTGCAGGGGAGGTACTGACCCCCAATTTCCATTTCTCAGCCAGCATGAGCGCCAGGCAGGAGGGCATCCTATAATGGGATGCATCAAGGAGAGTCCCTGCACACCATTGCACAAGGCCCTGACACCAGCTTTGTGATAATGCCTTAAGTCACCATCCCACTAGTTGTTTTCAACTTTTTTCCAGAAAGGGAAATGTGTTAGGTTTAATTCTGATGTCATACAGGTCGGGTGCACTCGGGTTTTCAGCACCAAGAAAGATGGACGGATAAATTAAACACAGTCTGAATTTTTTTATGAAGGCTGTATATTCAAAGGAGGCATTTGGTCAGataaaatcaatatttgtcaGTTTCATCACTGTTGTTGTTGGGACAATCTTAGGCCATTGATTGATAAATCTGTTAATGTCTGCAATCAGTTAATCAAtggaggaaataaataaaatatttctacAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01409	tRNA-synt_2d	tRNA synthetases class II core domain (F)	Domain	Interproscan
PF03147	FDX-ACB	Ferredoxin-fold anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002319	Domain	Phenylalanyl-tRNA synthetase	Interproscan
IPR004530	Family	Phenylalanyl-tRNA synthetase, class IIc, mitochondrial	Interproscan
IPR005121	Domain	Ferrodoxin-fold anticodon-binding domain	Interproscan
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR036690	Homologous_superfamily	Ferrodoxin-fold anticodon-binding domain superfamily	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004826	Molecular Function	phenylalanine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006432	Biological Process	phenylalanyl-tRNA aminoacylation	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-