Gene detail

Detailed information of KAJ8417104.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8417104.1	PROTEIN SIDEKICK	AAFF_1.1_unplaced_4	3101859	3146952	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00283310

ATGCTTGCCCCATTCGACGATGTGGTCGCTGGACGCGACTCAAAGGATGTGATCCACTGGTCAGACGAGCTGCTCTGTGCCTTCAGGTACGCCCAAAAGGCCCTGTCCTCGACTCATGCCATCACGTTACCACGGCCTGCTGACCAGCTGTGGATTGTCACTGATGGTGCCGTCAGAGAGCCAGGCCTAGGGGCTACATTATACATCACGTGTAAGGACACAGTGAAAGTGGCAGGATACTTTAGCGCAAAACTGCGCAAGAACCAGACGTCCTGGCTGCCTTGTGAGATCGAGGCCCTGTCTATAGCGGCggctgtgaagcactttgcccCCTACATAAtccaatcttctcagagaactTGTGTTTTGACAGACAGCAAGCCGTGCGTCCAGGCCTTTGAGAAGCTGTGCAGGGGGGAGTTTTCGGCAAGCCCTCGTGTCACCTCTTTCCTGTCTACGGCTAGCCGGTTTCAGGTGTTGATCCGGCATGTGGCGGAGCGGCTATCCTGCCATCTGATTTTGCCAGCCGCAATGCACCGGAGTGTGAAAGCCCTACCTGCCAGGTCAGCATGGCTAGCCCTACAGTCGGAGTGCTCTGATCTCAGACGGACCTGCGCTCATCTCCGTCAAGTGATCAGGACTGACCCGGCCCCTGGGTTCGCTGCATTGGCGGGGGATGAGGTCCTCGCAAAGCACCGGCTGGTCGCTGAAGTGGGCAACGCCAAAAATATCAACAAAAACCCAGTCGCTGAGAAGGCTGTTCAAGAGCTTCAAGGTGTATTATGCTTTAGTGAGTTGTTTTTCATCAAGGAGCCCCATGACGTGACTGTGATGCGGAAGGACTCGGTTATTTTGGACTGCCAAGCACACGGAGAGGCgccaattgatgtcaggtggctGAAAAATGGAGTAAGAGTCTCGGAGAATGAACGGGTCTACCTCCTCTCCAACGGCTCCCTGTACATCTCAGAGGtggagagcaggagaggagacAAATCAGACGAAGGGGTCTACCAGTGTCTTGCTCAGAACAAGTACGGAGCCATCTTGAGCCAGAAGGCTCGTCTAACTATCGCAAGTATTTCCCCCTTTGTGATCCAGCCCACATCAGCGGTGGTGACGGAGGGGTCCGTGGCCAGATTCACCTGCCAGGTCACCGCCAGCCCTCCCGCAATCATCACCTGGGAGGTCAACCGAATCACGCTACCTCTGGCATCAGAAAGGATTACGGCCTTGCCCAATGGAGTGCTACAGATCCACGATGTGGAACAGGGAGATGCTGGAAATTACCGCTGTGTGGCCACCAACATTGCCAACCGCCGCCGGAGTGCTGAGGCTGTGCTCACTGTCAACCCAGCTCTGGGTCCCAGGCCTCTGCAGAGGCCACAAATCATTGCCGGGCCCCAGAACATGACCACGGCCCTCCACCAGAGCGCCATCCTGGAGTGCGTGGCCACCGGCAATCCCCGGCCCCTCATCTCCTGGAGCCGCGCGGACCATAAGTCCATCGACGTTTTCAACACCAAGGTGCTGGGGAATGGGAACCTGGTCATCTCAGACGTGAAGCTGCAGCATGGCGGTGTGTACATGTGCCGGGCCACTACACCCGGCACCCGCAACTACTCCATCGCCTCGGCAAACCTCACCGTCCTAGCCCCTCCCTCGCTGGTAGAGTGGCCCGAGAGCCTGACCCGTCCACGGGCGGGAACGGCCCGCTTTGTCTGCCAGGCTGAGGGCATCCCCCTGCCCCACATCACCTGGCTGAAGAATGGGGAGAAGGTGCACTCCAATGGCCGGATCAAGATGTACAGCAGCAAACTGGTGATCAATCAGATAATCCCAGAGGACGACGCCATCTACCAGTGCCTGGCGGAGAACGACCAGGGCTCGGTGCTGTCCATGGCGCGGCTGATTGTGGTGATGTCCGAGGACCGGCCCAGCGCGCCCAGGAACATCCGTGCCGAGACCGTGTCCAGCTGCGCCATCCTGCTGGCCTGGGAGAGGCCGCTGTACAACTCAGACAAAGTCATCGCCTACTCTGTGCACTACATGAAAGCCGAAGGGTTAAACAACGAGGAGTACCAGGTTGTCATTGGCAACGACACCACACGTTACATCATCGATGACCTGGAGCCAGCAAACAATTATACTTTTTACATTGTGGCCTACATGCCCATGGGAGCAAGCCGTATGTCTGACCATGTTATCCAGCACACCTTGGAGGATGTGCCCCTGCGTGCCCCAGAGATCAGCCTGACCAGCCGCAGCCCCACCGACATCCAGGCATCCTGGCAGCCCCTCCCACCCAAGCTGAGCCGAGGGCACGTCTCGGCCTACCGGCTGTCCTACCGCACCAGCACCGATAACACCGTCACCTCCCTGGAGCTCCCTGGAGACCGCGTCCAGCACCTCCTGGAGAAACTGCAGCCCGACACCATCTACCTTCTGCGAATCGCGGTCGCCACCCGCGTGGGCTGGGGGGAGCAATCCGCTTGGACCTCCCACCGAACACCCAAATCCTCCAGCACCAAAGtgccaCTGGCCCCAGAGCTGCAGTTGGAGCCCCTGAACTGCACCACCATCGTGGCTCGCTGGCAACCCTCCCCGGGCAACTCCGCCAGCATCCAGGGCTACCGGCTCTTCTACCGGGAGGAGAGTCAGCCTGAGAGCGCCCCCACCCAGCTGCCCGCGCAGCACGCCCAGCACATCATGGGCGGTCTAGACCCAAGAAGGAAGTATCACGTGAAGCTCCTAGCCTACAGCTTTGCGGGAGAAGGCTACCAAGCAGACCAGACAGTCAGCACTCCTGGATGTGtctCGGTTCGCGATCGCTTGgtgccccctcctccacctccccatCACGTGTACGCCACGGCCAACAGCTCAAGCACGGTGCACCTGCAGTGGGGCCGCCCCGCCTTCTCCACAGGCCAGACCGTCAACTACACCATCCGCTGCAACCCCGTGGGCCTGCAGAACGCCTCCCTGGTGCTCTACCTGCAGACCGCTGAACAGAGCTTGCTGGTCCAGGACTTGGAACCCAACACCAGGTACGAGTTTGCAGTGCGTCTTCACGTGGAACAGCTGTCCAGCCCCTGGAGTCCAGTGGTTTACCAGAGCACACTTCCTGAAGCACCCAGCCAGCCGCCCTCAGGAGTGAAGGTGACCCTAATTGAGGATGACACGGCGCTGGTGTCCTGGAAGCAGCCGGAGGAGTCCAACGTGGAGGTGACGCGATACACCATCCTGTACGCCTCCCGCAAGGCCTGGATCGCTGGAGAGTGGCAGGTGCTGCAGAGGGAAGGCACCATCACCATGGCTCTGCTGGAGAACCTACTGCCCGGGAGCATCTACCTGGTGAAGATCTCTGCATCCAATCAGGTGGGAGACGGACCCTTCTCCAAAGCGGTGGAGTTGGTTGTGGTGTCCGGGGGCTCCCAGTCCggccatgatccaaagcactcCGGTGGCTTGGCAGAAGCTAAAGCGTTCTCTGATGGATTCTACCACATGGACCAGAAGTCGATGACTGGTATCATTGTCGGGGTGTGTATCGCCCTGGCCTGCATCGTCTTATGCGTCTTGATCCTTGTCTACAGAGGCAAAGCCAGGAAATCCTCAGCCACTAAGGTAATCAGGCAAGGGGACGGTCAGGATGGTCCTGGGAATCAGGCAGAGAATGCAGAGGCCCTGATGCCAATGATTGGAAACCACTTCATCGATACGAAGGGAGGGACAAATCTGGTCATTAATAGTTCCGGTCCAATCAACCCCAGCAGTCCCAGGAGGAAGAAGTGGTGGTTCTTCAGTAAGGAGGAGAACCAGGATCCCAGGAGTGGCCAGGCTCAGAGGAGAGGCCAAAGCACGTGCACCTACCAGCAAGGAAAGACGGACCTGAAGTATGAGGAGGAGTTGCCCTCTTCCCCGCAGCAGACCACCTCCTTGAAGGTCCTATTCGGGCCCATGGGGGACACCGAGGGCTCCCAGAACAGCGAGGGCAGCCATGAGACAGGCGACTCTGGGCGCTACTCACATGACGAAACCGAAATGACCAACCTTTCCTCCGGCCGTAACAGCCGACCCCCTTCCCTTGGGGCTGAGGACAGTGGGGGTTCAGAGGACGGCCCCACTCCCGAGGAGGAGCGGCCACACCTGGTTGTGGAGATGGGCGACTCTGCGGAAACGCCCAGCCTTCACCACTGTCAAGCCccagacccccccccaaccTGCACTTCCTCTCTAGCAGTGTGA

Transcript

AAFF_T00283310

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-