Gene detail

Detailed information of KAJ8416651.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8416651.1	PROTEIN EIGER	AAFF_1.1_unplaced_5	1050364	1095776	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00325290

ATGCGTCAGATAGACCGTCCGGccccagGATTACCGCAGGAGATGGCCTCGGACCAGGGGCCCCAGTTCTCCAGCAGATTCTGGAAAGCGTTCTGTTCCCCTGATCGGCGCCAAAcccaacctgtcctctgggttccaCCCAGAGAtgaatggccagacagagcgctacaaccaggagctggggaagggactgcgctaggagaaggaggtggaggtgccgtCTGCCAAGGCCCTCATCTCAAGAGCCCGGAggtcggccagaagccccgctcctctctgtgttccccggactgttTTCCTGATACcaacctccgcctgcccattgaccacgtcttgcctgcctgcgACACAcgggtgctcactgagcccatccgctacacctCAGGCTCACTGAGCAGTGTAGTTGGTCCCTGCCTTCACAACATCAACTCTGAGCCCCCCGATGGTCCTCTGCTCTGGTCCCTGGTAGCGTTGCTGGTCACATTACCTCACCCCACCCCATGCCACCCCATCCCCTGTGACCTCGAACAGGACGGGTTCTCCAGAAACCCATTCTTCCAATGCATCATTGCTGAGGTACCAGAGCAGCACAGAACCAAAGAAGGACATGCCAAGGTGGGATATGCACTTTATTTCTACACCTACAGCTCATGGAAAGGGAGGTCAGTTTATATGGAGGACCTGTACGTAATGCCCGAATTCAGAGGGAAGGGTATTGGGAAGGCACTCATGAGCAAAATTGCCCAGGTGAGTGACCGGCTGCTGTGGTGCTGCATTGAGTCTGAGATCAACGCCCTGTTTACTGCATGGACATGGGGACAGACGCGGGACATGTCTCGGTCATTCAGAAATCTGCAAGACAGTCTTAAACAATTAAGTGCTCAACagtcggctctggccaccgggggtggcgattggctgtccaccccagggaggggggagggaagccgacaggatgttcgctgtgcacaggagtggctctggagtaccggtttacggttgacggcctggcgagtgctgtctcggaggagacgatacttcgccttcgtcactaccgGTACCGTAGTGGGAGATGATGGAGTTATCAAAGGCTGGACGGAGGAGCTTCTGAACGTGAGCAAGGCAGTGCAGTACAACCCTGACACCGGCACCTTCAGGGTGGAGAGAAGTGGAGTCTACTTCTTGTACTGCCAGGTGCACTTTAATGAGAACCAGAGTCTCTATGTGAAGCTGGTGGTCTCTGTGAATCAGGCCCGTAAGCTGCAGTGCGTAGAGGGATACGGAACCACGCCCTCCGCTGGCTCGCACCAGTTCCACTTTCTCAAGCCGTGCCAGGTGTCAGGACTACTGCGGCTGGAAAAAGGGGCGGAACTTAAAGCCACTACGATTAAATCGTACAGACTGCACACTGTTGGGAAGCACTACTTTGGGCTCTTTAAACTTGTAGAGGAGCTGAATTCAGTCATCGATGCAGATCACCTCTCCACTACGCTGTTCTCTCTTCCCCAGCagcagctctccctccctctccttcttcaGAGACATGGCGGGGCCGTTCAGCActgcgagagagaggagagggggaaacagCGCGTGCTGTCACTGAGAATGGACCCCAGTCCTTGTCGCTACGGCATTATGAGGCGGTACTTTACAATGATGCTGTGCACAGTGGACTTGGGCATCCGCAGCTCTTGCCCAATGGCGCCCTCCGACTTGCCGTCCTTCCACCGGTCCACCACACTGCCCTTATTGGCCAGTCTGCTCAGTATGCTCCTCTCAGACATCTGCAGGCGGGCAGCGATGGGCGGGACTCGGGAAAGGGTGGCAGGCAGCCGCGTCACGTCCGCCTTCATGTCGCTCAGCAGCTCCTCCAGCTGGTTCAGCACTGCAATGACAACAGCCATTCCGACAgtagggaggggagagaggcctTTTTTACAGAAGATCTGGCGCCACAGTTGTTCCCCAGTGAGCTTTGCTGCATTGGGTAAATGA

Transcript

AAFF_T00325290

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00229	TNF	TNF(Tumour Necrosis Factor) family	Domain	Interproscan
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR006052	Domain	Tumour necrosis factor domain	Interproscan
IPR008983	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR051748	Family	Tumor Necrosis Factor Ligand Superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15151	PROTEIN EIGER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005164	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0006955	Biological Process	immune response	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0048018	Molecular Function	receptor ligand activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-