Gene detail

Detailed information of KAJ8415390.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8415390.1	RAN BINDING PROTEIN	AAFF_1.1_unplaced_9	3628056	3637357	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00423700

GGAAAACACGTGTGTCACAACGTGGGGACGATGGGAAAATAATACGTTCCAATTTCTCACTGATTCTAACAAACGTATTTTCCCCACTAAGACATTATATTGTTAGTGGAGAGGCTGCTGGGAGTGAGGTAAATAACTGTGGGAGGAGAACATTTTCAGCGCGCGAAAGGAGCAGCAGGAAGAGAGTCACGGAAAGAACGAGTAGGCTTGGCTCGAAAGACGAAATTCCGCAATCCCTAAACATCTATAGTAATATGGCTGATGCAAAGGAAACACAAGAGGAGCATGAGACCTCAACAGATAACACTGAAGAGACCAACCACGACCCCCACTTTGAGCCGATTGTGTCACTCCCTGAGCAGGATGTTAAAACACTAGAGGAAGACGAGGAGGAACTCTTCAAAATGCGGGCAAAGCTCTACCGGTTTGCCTCAGAGAACGACCCCCCTGagtggaaggagagggggacGGGGGATGTCAAGCTTCTGCGACACAAGGAGAAGGGCTCGATCCGCCTGCTGATGAGGAGAGACCGCACCCTGAAGATCTGTGCCAATCACAACATCGTTCCTGCGATGGAGCTGAAGCCGAACGCGGGCAGCGACAGAGCCTGGGTGTGGAACACACACGCCGACTTTGCTGACGAGCACCCCAAACCAGAGCTGCTGGCGATCCGCTTCCTCAACGCAGAGAATGCACAGAAATTCAAGGCAAAGTTTGATGAATGTAGAGAAGACATTAGAAAATGTCCAGCTTTTGTGATGGTCCCCATGAGTCCGTCCCCGACCAAGACAGACCCAGGCAACACAGACGGCGCAAACAAATTGGTGGAGAAACTGGAGGAGCTCTCTGTAAAGGAGGACAAGACCAAGCCATCGGTGGAGCAGAAAGAGGCAGAGTCTGAGAAAACGGGGGAGAAGGCTGAAGAGAAGAAATAAAATCAGGAAATTGGCTTTCCTCCGATCTTCAACTTCAACatcatttttcccttttttctacAATAGACTCTTAAGAAACTGAATTTggacactttgcattttgttttcctgtaagtttattttttagttaTTCATTTGTTTGCCCTCAGATCACAAGACCTTGGAGGCACTTCAAAAGTATCCATTCCCCagtcataaaaaaaatgtactgtgcttttctttctgcatttttttttctcttttttttctttccatagTGGAAACGAGTTGTCTGTATTCTGGTCACCTGTAACTCGAAGTACCTTAACATGACGCTGTACTGTGAAATAAGCCTTGTGATACTGATAATTCCCACATTGGGTGACATTTTCTGTTTGCGCTTTTTGTTTAAGAATCAGAAAATGTAGTTGACTGGCGCACGTTTGTTTTGAGACTGCCTGTGAATGCCTGAAGTTTTGGAAGCTAGGCGAGAGTTTAATGTTGCtctagcccccaccccccagtgaCCGTGTCTGAAAACGGATGCCTTTCACTCCTAGACTACTCCACGCTACACCTTAGTTACCATTTACTCTAGATGACTCCATAACAGGCTCACTTGGAGCAAAGCTTCCGAAGGAACAACCGTGTAGATCGACGGCCATATTACTGGAACTGAGAACGTCCTGATGGGTCAGTTTCACGCAGAGTGTTTGCTGAACTTTGATGCCACAGAAGTAGACCAAGCGGTTGCTAAGATTTGACGTTTGAGAGTTTGTCGGTAACCCTGTCCTGAGTTCTCTTCAAAAGTCAGTTTGAttatctccccccctccccagccctgTCAAACTAAAATCTTAAGTATTTTGAGAAAAGATTCCAAAGAGGAACAGTGTAGAGGtggcaaaaatgtatgtaaCCTATCAGAGCAGTTCAATAGTCTCCGCTTCTTCAGTGCCAGTGCatctgtaaataaaaaaacccactgAAATGGTTTGCTTTTGATATActcaaaatacatacatatacataaggcatttagcagatgcttttatccaaagcgacttacagtactgaatgcatacatttttcagtatatgtggtcccggcgggaattgaacccacaacctcagcgttgccaacaTCACACTACCTACTGAACTACACGGGACCACatcaaaatcaaaacagaacaaaatcaaatgtattcGCTAATACAAGTGATGGTTCCTCCCCCATGggataacaataataaccacTTGTCTTTTTAGCCACTTGTCTTTAAGGGCGAAAACTGGATTTTAAAGCTAAATGAGGCGTGGATGACCTTTGCATGCACAGTGCATTCAGGTACAAGGTAGTGGGGAATGTGGCGCTTACGTGCTCCTCTCTGCTTACTGCCAAAATGGCTTTAAGAGGTTGCTGGTGATGAGtaggggttggggtggggggatgatTGGACAGACCATGTGGAAGTTGGGGTTTGCGTAATTGCTACCTGTCCAAGCTCTGCTTGTAGTTGAGGTTTAAAGTATCATACACCCAACCAGTACATGCGTGACCAGCCCCAGACATTAAATCACCTGGTTAAGTATATACACATTCAGAACGTATTTTTAATGTTGCTTGACTTAACTCTTTCTGGCATTCCCCACTGTAGCTAGCACTTTCTGACCGTGTGAACATTGGCACATCAAGTTTCATTGGCAGTTCGATGAAGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00638	Ran_BP1	RanBP1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000156	Domain	Ran binding domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR045255	Family	Ran binding protein RanBP1-like	Interproscan
IPR045256	Domain	Ran-specific GTPase-activating protein 1, Ran-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23138	RAN BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0006913	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0046604	Biological Process	positive regulation of mitotic centrosome separation	Interproscan
GO:0046907	Biological Process	intracellular transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-