Gene detail

Detailed information of KAJ8415324.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8415324.1	CALCINEURIN B HOMOLOGOUS PROTEIN 3	AAFF_1.1_unplaced_9	1635541	1646902	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00423040

GAAATGCGAGCAGCGGGTGATGCGTTTCATGTGATGATAAGATAAGGAAGGTTATCCACTCAAGATTTCGTTGATCGTTAACTCGACATATCATAACATTGTTATGCACTTGACGTACGCGTGATATGCTTGCCTATTATCTCAGTATGCCCGCAGAAGTTCTAGTCGTTAATAGAAACTTTTTATGCATTGCGAAATGAAGACGCCAAAGAATTAGGACCCAGGGGAGACCGTCGACGTCGTTCTGCGAATAATACAAACTGCATGTGTTTGAGGCTTCCTTGTAACAACTGTAACTAGAGCTGGGGGCTAGGGAGTGCGCGTCTGTGCGAGCGTATTTCATTAGGATACCTGCCATTACCATCGCCCGTGTTAGTTTTAAACGTGTGAAGATTTCGCAGTCACAAGGAGATCGAAATAACAAACAGCCTTCATTATGGGAGCCTTTCAATCTGCACCCGGTGAGCACGAGTTCCAAGATCTCGCTGACAAGACAGGGTTTTCTCTGGAGCAGATCGGGAACCTTCAAAACCGATTCAAGCAGCTGAGCCACAATGAGGACACACTAAGaAGGGAGGACTTCAACACCATCCCGGACCTGGCCTGCAACCCAATTCGGGCCCAAATCGTCGAAGCCTTCTTTGACAAAAGAAACTACCGCCAGGGCGACGCGGGAACCGTCCGGGAGATCGGCTTCGAGGAGTTCGTCACCGTCATGTCCCACTTCAGGCCTCCGGAGCTGAACATGACGGACGAGCGGCGGGAGGCCTTCAGGAGAGAGAAACTCCGCTTTCTGTTCAACATGCACGACACTGACAACGATGGCACCATCACCTTGGAGGAGTACAGGCATGTCGTGGAGGAGCTCCTGTCTCGATGCGGCACGATGGAAAAGGAAGCCAAGGCCATCTCGGACTCCGCCATGCTGGAGGTCGCCAGCATCAACATGGGTCACATGGAGCCAGACGAGTTCTACGCCGGAATAACCTTTGAACATTTCCTCCAGATTCTGAAAGACCTGGAGATCGAGTCGACGATGCACGTTCGCTTTGCCAACGCCGCACCGATGACGTGTCGCAAATGAAGTGCGCCTCCAGAAAACGGGCGCGCGACGGTGGTGCGTTCGGCGAGACGGGGCGTCTGCTGCTGTGCGTCGAGGAGGCGGCGAGGCACTGTGGGtggtgatgttttacactgttcAGAGACACTAGCCCTTTAATACCCTTTCCCAAGTGATTCTGAGACATGGTGACCGGGTACCTTTAAGTATAACAcgttgtgtgtgcaggtgcacaTGTATGCAATGCAAGGATGGCTTCAACCAAATCGGGTGACTAAACGCTAGGTGTCTGTCAACTGACTTGACTTCCTGCCAGAAAGCAGGACCGGCTTGacgaaaatgaaaatgtacacatgcGGTGAATTTGTTGTGGCCGAAACCGACACCTCTCGCTTTTCAGTTATGCAAGAAGGTCTGAGAAGCTAATTATGTATGCAAAACCATGCCATAAAAGAGAATACACTTACGGATGTCCTGTTTGACCTGATGCCTGTCACGGGAGTCATGTCGCGTCGTCTTTGGTCATCAGCATACCGTAggtcagggttcctcaaatcacggtcctcgtgggccgagcactgctgtttttccgcccttcctttacctgggagtcaggtgtgaagactctttggccaatcaattgcactaactGTTAACttaattaactacctgagagaaaggaaaaccaggaccgaatttggattcgtgggccagatttgaggaaccctgccatAGGTAATAAGCGGAACCTGACAATAATGTTCAATATTACTTATTGTTATGGTATTGATTTCACAGCACACCCGCGATGAAGTCGACTGGTTCCTCCTCCATCACGCGTTTCTCTGTGCCTTATCTTTTGCCAGCTGCGAATAGACGGAACTGCGTATGTGAAGGGTTACGAACTTACCGGTGCCCACTGGGCGGCGGAAACGTGCAGATGTTGCATTAGCATGGAGACATATCCATGTATTTGGACATAGATATATTCCACGTGACCGTGGTGACTGATGTCAGTACTGTTAACAAAAGAAGCGCACAGTGGCAATCCAAGAGGGAAATGGTGAAACAGCGCATTAGGAAATAAGTGCCTTGCATACAAGCCAGTGTACAAGCCAGTTGATGTCTCGGCCAAGACAAAGGTTGTTTTTGCCTGTATGTAATACATAGAATTTGGACGGATGGGTTGTTTGATTGTTTGGGGAAAGCGAGTAACTTGCTGTGGTCATGATTAGAGTCAGGGAACACGGACGGCATGCATATGCATGTTTATTCCCATAAACGCCATACGTTTTTTCTAGTTTTAGTCAATTACATTTGTTGTCGCTTTGTTCACGTGAAATGCAAACGCCTAATGGTGCCGATGTTCGAGTATGATGAAGTGTATTgttgaaaagtatttttctgATGTTATATATGATATTTTGGGGTAAATATGTGATTCCCCTGTTGTAGATACTGAGTTGGTTTAGGCCAGGTGGGTAAAGTCTAGATAAGCCAACTTCTAGTGGAGTCGGGGGGACCGAGAACGGCTAGGTGGGGCTGTAGGTTCTTCCTGAGAGAGATGTGTGGCATTGTTCACCTTGCCGTGGCAATACTTTAGACCGTTAGGGCTAGCAGATATTTAGTGCGTCAGTcagttttattgattttttgtATCTGGTGGGTCACTGttcactttttttgttattaCCTTGTGGAGaaatacatttcaacattttggGGGAATTATCACATTTTTGGTTCCTCCTAAAGACCACTACCCCACACTACCTTTTGACACCTGCGTGCAAATGTCCCGTCTCAGTCAGGTGAGCATCCTGCGTTTGCATGTTGGCGAGGTGTTTGCATAGAGACGCTCTGATGGATGCACATGACAAGCCCCGGTGGGCGTGACAGCTTGACACGTGACATCGCGCAGGTCTGTCGATTTAAAAACAACGtaccaaaacaaaaaccccaaaGTGCTCCCTCTGGCTGAAGCGAGCAGCTTCGCAGGACTGGCTGACTAAATGTATCCTCCCTCCGGGAATCTCAAAGCGCAAGACAAACGGTCTGAAATGTGCAGCGTGGAACAGGGGGCCAGATCCCGTCCGCCTGGGGGAGTTCACAcggcctgccctgccctgccctgccctgccctgccctgccctgccctgccaggtccCCGTCTCCGGACCGCCACCGGTGTCCCCACGCCCATTTGTTTTGGACCCGGTCCTGATACGTGGGATTCTGCGCGGGGCTGAGGAAAGGGCCATCAGAGAGGGTTCTGCTTTTGGGGAGCTCGGTCCCCTGCCCTGTTCCTACAACATCGCCACACGGTGGCAACacgtttaataataatataataataataataataataatataataatgtttcAGTGCCATTTCCCTTAATGGTGACTACTGGGCCTTTCCTTCGGTCGACTACCCCACCGTGGCCATCTAGTACACGGGAGCGCGACGCATGCGCAAGTTCCCGCTCTTCCACAACACAGAGCAGGGCTGCCTAGCCCTGATATAGATGAATTACAGCCTGACAAGCGCGAGTAATGTAAAGCATGCTTTATCACCGCGGTCTGATACATTGAGAAATGGCTCCCATTATGTGGCGGCTCACAAGGTTACAATTTGCAAGGCCCTGAAGATTCCTCATCGTAGAAATATTTATGGGTCTTGCCGTGATTCGGGACACGCTCATCGACCCAGCCGAATGTTATAAAAGACAGACGAGGGGAGAGAACAGAACAGGACATGTTTTGTGATCGAGGCTTTGTGATCCCTCTGGCTAAATTCCTTATCTATGCGGGCGGCGATACCAGGGCACTTCAGCTCGCGGGATCCTGGCATGAGTCCTATTTCAAGGCAGCAGAGAGGGGGGCGTCCTTTTACTTTTGCGAATGCCATTAGTCATGGTGGCGTCGCGTAACAGCTAGCCGAGCTCAGGGACAAAGCTGTGCCTCAGCCCCCTTCCATACCTCTTCCATAGCATGGCTCTGTTCCCTCTcagatgtttttaatgttttttcccctcaacaTATTTTAGCTCTGCTGACCTCTAGTGGCTGCAAGGGTGTCCTGCAACTGCAGTGGTGTTTGCGCTTCAATTTTTTCAACACTCCACCTTCTCTCCGCCCACTCTTGACACACCTCTGGCGCCTCTTTCCTGCATTGCCCAAAAGCAATCTCTCTCAGTGTACAACCGTATTCTTTAAATTCTTTACTTTTGTGCTTCTGAAaggtaataatataatgtaattatttttttaaataaattattctgTATAACACAGTGCCTTGTATAAAGGCTTGTTTGAGCCTTTgcagtgaattattattatgaatgcatatatttgtaataaatgaataaaaaaatataaaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00036	EF-hand_1	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR052490	Family	Calcineurin B Homologous Protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46823	CALCINEURIN B HOMOLOGOUS PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0019212	Molecular Function	phosphatase inhibitor activity	Interproscan
GO:0030854	Biological Process	positive regulation of granulocyte differentiation	Interproscan
GO:0032417	Biological Process	positive regulation of sodium:proton antiporter activity	Interproscan
GO:0033628	Biological Process	regulation of cell adhesion mediated by integrin	Interproscan
GO:0072659	Biological Process	protein localization to plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-