Gene detail

Detailed information of KAJ8414719.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8414719.1	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	AAFF_1.1_unplaced_11	22457	51631	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00022420

CTCCTACCTGTCATtctgtgatgtttttgtttgtcgttTCCTTAATACCAATCAGCCTTCTTGTCGCCGTTAATCCCGTTGGGTACCTCATGTAGTCTTTGTCAGCCGGACGGCTAGCAAGTCCGCTAATTAACTAGCTACATTAGCTGTCCGTGTTTCTTGACTAATCGAAGTTTCATTGTCACAAACTATACTGCACAGCCGTTGTCTGCTACTTGTAACTCAGTGAGGTGAGGCTGTCGTTGTACTCGACGAGAATTGAAAGGGGGCTGCGCAACTTCCTCTTTGGAGGATGGATTTGTGCTACACTGCCCCCAACATAAATCTGGTCCTCGCCCTAAACATGGGTGTGTTCGTTCATTCTGGGAAACGTTCAATGTTTGCGAGGAAGGCAACTTGTAAAATGATCACGGAACAAAATAAGAGAAACACCTGGCGCATTCCGCTTTGGGACCACACTCCATGTAAAGTGCTAACAATGTTTATTGAtctctagctaatgttaactgtgttttggatatttatttatttagctagcttGGGCCAGCAAGTTAGCCAGCCAACATTCAGTACAATAATGCAAAATGCTTGAGGTTTTGTTTGACATGTCTTTGATTAAATACATCAgtagatttttacatttaggtaAAGCTGTTTTGCAAAAATTGACAGGGATGAAAATATTCCCAGCATACACCCGTACAAACTTCCGGCGCAGCCAAGTGCATTATGGGTGGCGGAAAATACGCCTTTTGAGATAGTTGCACGCTAGAAACTGGTTTTAAGAAGCTGTGGTGTGGAGGCCAATTTTTCAACAAATAGCTAACTTATCTTTTGAATTCAAGGCGAATTACCTGTGAAGATGTCTATCGGCGTTCCAATTAAAGTCCTGCACGAAGCAGAGGGACACATAGTGACCTGTGAGACCAACACTGGGGAAGTGTACAGAGGGAAACTGATCGAGGCAGAGGACAACATGAACTGTCAGATGGCAAACATCACAGTGACATATAGAGATGGGCGGGTAGCCCAGCTAGAGCAGGTTTACATCCGGGGAAGCAAGATTCGTTTCCTGATCCTGCCGGATATGCTGAAGAATGCGCCCATGCTGAAAAGTATGAAGAACAAGAACCAGGGATCTGGAGCAGGAAGAGGAAAAGCAGCCATTCTCAAAGCCCAAGtGGCTGCAAGAGGTCGAGGACGTGGCGCGTCGCATAACGGAGAGCCCAGCAATCAGGTCCTGATGGAGGTGCGGTCTGGAGCCACTCAGTCGACGCGCCCGACACACACGCAGCCCCCTGTGCTGAACCCGCCGGGCCCAGCGGCCATGGAGTCCCTCATCGTGGTCACGGAGTACGAGCCCAGCTGCTCCGGGGAAGAGGTGGAGGACATGGACAGCTCCgacacgcccagcacctccccCATGCACCAGGGCCACGAGCTCCTGACCCAGGCAGGGAGCCCCACGGCCCTGTTCCCAGAGTCCCGGGAGAGCAGGTCCAGGCTCAACCTGTCGGACCGCAAGCTGTCCCTGCAGGAGCGGCCTCACTCCGCCTCCTCGCCCCTCGGCTCCCCGGGGCTGAACGGACGTTACATCTACCCTTCCCTGCCCTACTCCCCCATCACCTCCCCCCACGcctccccccgcctcccccgcaGACCTACAGTGGAGTCACACAGGGTCTCCATCACTGACCTGCAGGACTGTGTGCAGCTCAACCAGTACAAGCTGAAAGATGAGATCGGAAAGGGCTCCTACGGAGTTGTCAAGCTGGCGTACAATGAGGCCGACAACACATATTATGCAATGAAAGTGCTGTCAAAGAAGAGACTGATGAGGCAGGCGGGGTTCCCACGACGGCCCCCACCTCGTGGTGCTAAGATAGCCTCTGAGGGCTCTGCCCAGCCCAAGGGGCCCCTGGAGCGAGTATACCAGGAGATCGCTATCCTGAAGAAGCTGGACCACCCGAACGTGGTGAAGCTTGTggagGTGCTGGATGATCCTGGTGAGGACCATCTGTATATGGtttttgagCTGGTCAAACAAGGGGCAGTGATGGAGGTTCCCACAGACAAACCGCTGACCGAGGAACAGGCCCGCTTCTACTTTCAGGACCTGCTGAGGGGAATCGAGTTCTtgcaTTATCAGAGGATAATTCATCGAGACATTAAGCCCTCCAACCTCTTGCACTGTGGGGACCCCAGCCTTCCTCGCCCCGAGACGCTTTCGGAGACCAGGAAAAATTTCTCTGGCAAGgCCCTGGATGTATGGGCAATGGGAGTGActctgtattgttttgtttttggagtgTGTCCCTTCATGGATGAACGGATCCTGAGTCTCCACCAGAAGATCAAGACCCTGCCAGTGGAGCTGCCTGAGCATATTGATGTGTCTGAGGATTTGAAGGACCTGCTCTTGAAGATGCTGGATAAGAACCCTGAAACCAGAATCTCAGTGCCACACATTAAGGTGCACCCATGGGTGACGAGGCATGGGGCAGAGCCCCTCCCCTCAGAGGATGAAAACTGCACCTTGATCGAGGtgacggaggaggaggtggagaacTCTGTGAAACACATCCCCAGCCTGGCTACGGTGATCCTCGTGAAGACCATGCTTCGGAAGCGCTCCTTCGGAAACCCCTTTGACTGGGGAAAGAGGGAAGAGAGGTGCCCTTCTGCACCAGGAACCCTGCTAACCAAAGGCAAGGCAGGCATTGGAAAATACTGCTTCATTCATAGTAATCCAAGGAAACAGGAGAGTGGGGACAGCGTGAGGAACACGGACTTGCCTTTTGTAGGGGAGGACGAGGTTCTGTCCTGATCCGGTgatggaggaagggggagaggggtgtggTCGGCTTGCCGCTCCTTTTCCCAGAATTAACATGCGCCACCAACATTGGGAGAGGGCGCTCCTCCACACCTCTGTGAGGGCACTGAGCTGTGTGGGGTGTCTCTAAGTCTCTAAGGAGCACTGCTTGGAACTCCAGTCATGCATGCTTGTCtgctgtttgaaaaaaaaaaaaaaaagaggaagaaaaaaaaaaggcatgctCTGACCGTGACCATTCCCCACACCTGTGCCAACTCCAGTAGACCATACTTTTTTGGGACTCCCCCCTTgtttcaaccaaaaaaaaaaaaacgtgggTGCGGTACAGGAACCTCAAAGATGGTGACAGACGTCCGTTTTTTCTCGGCGTCTCCGAACAGCTTGTTAGACGATGGCCTTTGGCGCAGCCAATTTTGTAACATATccaatatttgaaaaaaagggACTAGCTATTGATTGCACAGTGTACAGGGCATATCGGGCTACGGGGGGtttaaattatgcattttacatgtaaTATTAATGAAATAGTAGTTAAATGGAAATTGTTGTTCATATTCAAATATCGCATAGTGTGTAGTATTGAAAATGAATTGTTAGAACCTTTTTTTTCTATATTCATGAAGCACACAGATTTCCTGTTACAATAATGAATGCCTGTAGGGGGTCTATCTGTGGTTTAAACATCACTGGTTAATATACTAATATAAGATTGTTTTCAAACAACGTTCTTGCTCATTGACATGCAAAAGGGAGCGTTACGCTAACCTCATGACCTCAAAAGCCTGTTCATATTTAAGAGACAAAGCATGCTGTGTGGTCTCAGGGCTTTTATTTTGGAGGGGTGATGCACTGATGACGCCGAGGATGATATTTAAAGCGCCTCTGCTGGACGCAATGGCAGTGCTCAGCCAGGAAGCGCATGTCCTGGGATGACTTCTCTTCACTCCTTCTGCGAGGCATTGCATATTTGGGTTAAAGTGCAGTTTTTTTCACCAAAACACTATAATAAAGGACAGTTTGATTTAGTTCTGTATCTCACATAGCATGCGATATTCTGGAAGGGTACACTCTTCCCCTTAGGGCAACACGGCACATGGATGTTCAGAATAGTTTAATGTTACAGTAAGTGTAGTAAGATTGCGGTAATGCACACTATGCAGACAATGAAAATGTTGCATCTGGGTAAAAGGGGGATTAGTTTGTAACACACACGATTATACGTGCACTTGTGAGCCGATGCAACTATTTTCACTTCCTGCGTTGTGAACTGTAGGTCAGGGTAGTGCTATGTAGTCACAGTTATAGGACACTTTTCTCGTATTTAAAAGTCAGTATGTCATATAAACCGAATGCTTCCACATATTTGTAATTTTGACAAGTATGTGTAAAATCTGTAGAGAAAGAAAAGGATATCAGATTAGTAGCTAGTATTACCTTACTTTTTTCTGCACGTTCATGCTACTCTGGGGACATATCAAATGGCTCTCTAATACTATGCATAAGGAAATCCACTCTTTGGTGCAATTGTAGACCCTCTCTAGCCTCCccttttgttttaatgtttgttgTTGACCCTCGGATGCCTCGTTAGTGCAGATTTTCAGGGTTCCCACGTATGAATACACTTAAGCAGACATTTAGAAATTCTGAATTAAAGGAATGTCTTTAGCTAGATCTGCATTGTACAGCGGAACGCCTACCAGTGAAAAACGTAAGGAAATGACCATATAAGGATGTGAGAATAACAAAACAACGTAGCACGGATGGGTATTAACTTGTAATGGTACTCGCAACGGCACATTTTATACAAGACAGTAGCTTGCAAAAATGCAGAGGTGTGTTGGAATACttgaaaatcaaatcaaatcaaatctcaAGCATTAACATTTTCATGATCAGGGGGTGGCATAATCACAGAGATCAACGTGAATCATTAAGAGAATATTGTATAAACAAGTCAAAAGAAGGCCTCTGCAGTACCAATGCACCTCGGTCTCAGGCTACGGGCATGGCCAGTTTCAAATGGCAAGGTTATGTCAAATTAGAATTTTGTCCAAAGGAATGATGGGATGGTGACCTCTATGTGAAGGGACTCTTTGTGCCTGGCACCCAGAGTAAGGCTGCGATAGGAGGGCTTGACTGCAGGCTGCCCGTGGATGTACCTGGTCCATGTAACTCAAATATTTGCATTTCTACATAGGTATTTaatcttttttcagttttttggtaACACCGTTTACCCACCCATGGCAGAAGAGCTACAGTTACATTTGCCAACCCTCATATCACTTCAGCATAGTAATATATGTTAGAGTGCCATGTAAATACACTAGCCAACTGCATGCTTACATATATAAGCTCTAAATACACTAGGTTTGGTGTAGTTCTGTGGAAGCCGATGGGTGAGCAAGCTTGTGGTTGATTACCCTATACATATTGTATCCAGTTGCTTGTTTCAATAAAAATTACAGTTGCCTTTAGTGAGGAGTGAGCTGTGTGTCCTTCGTAGTGTTGta

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF01423	LSM	LSM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001163	Domain	Sm domain, eukaryotic/archaea-type	Interproscan
IPR010920	Homologous_superfamily	LSM domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR034099	Family	Small nuclear ribonucleoprotein Sm D3	Interproscan
IPR047575	Domain	Sm domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24346	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000387	Biological Process	spliceosomal snRNP assembly	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004683	Molecular Function	calcium/calmodulin-dependent protein kinase activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0045860	Biological Process	positive regulation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-