Gene detail

Detailed information of KAJ8413916.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8413916.1	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	AAFF_1.1_unplaced_14	3690509	3709112	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00065140

AGTacagcagggggagggagggggtgtagTAGAGAGCCCGCGAATGCCCTGGCGCTCCTGGATCCTAAACATGATTCGGTGATCGGTAATGCAGGAATGAGTTACTGACAGCGGCACCAGGCTTATCGCATGTCTGCTCGGCTGCGCTTCTGAGCGAACCGCCGACGGGTATTTCCGAAGGAGCGAGGTTTAAGCAGTCCTGGATTGGGCATCGAGTCGGCCGCGATGATCTCGTTGCGGAGGGGCCACGGAATGGCGCGGTGGGGATTGTGCTGGGTTCTGCTCGGGCTCTGGAGGTTCAGCGCCGCCTGTCCCGCGTCCTGCACTTGCAACAACTCACGGATCTCGTGCACCGATGAAGACCGAGGAATTGTGTATTTCCCACTTCTACAGTCCGACATAAAGATGGAAGATGTTACCGAAATATACATTGAAAATCAGAATAGATTCTTTGCCATCAACGATAAGGACCTGAAATTCTATAGGAACCTCAGAAATTTAACTGTGACAAATACTAAACTGACCACTATATCTCATCGGGCGTTTCAGAACAATGGGAAACTCCAGTATCTgAATCTCAAATACAACAACTTGTCCTTCTTGTCCTGGAAGAGTTTAAGgcatttaaacatttcatttcCGCTGTTGTCAGGGAACCCTCTGCAGTGCCGCTGTGAGAATGTGTGGATCAGGCAGTGGCTGGGGGAGGAGTCAGACCGCCAAGAGCTGGACTGTGTGGAGGACGGGGGCAGGAGAAGGCCCTTCTccaaactctctctccctgactgCGCGTCTCCCACAGTCAAGCTCAGTCCATCCAGAATCTCGGTCGTCGAGGGTGGCAGTGCCGTGCTGGTGTGCCACGTGGCAGGAGCACCCCGCCCTCAGCTCCTGTGGAACGTCAGTATCCTCGTCTCCAGCTATGAGgTCAACACTTCAAATCTGATGTCAGAGCTGTGTCTCAGCAACCTCTCCTCCAGTGACAACGGCCGCAGCGTCTCCTGCATTGCTGAGAACGTTGTTGGTGAAAACACAGCCTCTGTTGTCCTGGACATTCTGTTTCCTCCGGAGATCACCAAGCTGACGGACGCCGTGTCGGACCATCATTGGTGTATCCCATTCAGTGTGGCTGGGAACCCGCAGCCGGAGCTGCAGTGGCTCTTCAACGGCATAACCCTGCCCGAGGGCGATTACATCGGCACCAAAATCCACGACACGTCAGAGAATGAGTACCACGGCTGCCTGCAGCTCGATAACCCCACGCACGTGAACAACGGCCAGTACACCCTGCTGGCCAAGAATAAGTACGGACAGGACGAGAAGTCAGTCACCTCCCACTTCATGAAGGAACCCTGGGAAAATGGAACAGCAACAGATCCTCTGTATTATGACACCACCACAGAGGACACACCTTTGGAGCAAGAAGACAGCGCTGCGGTGTACGTGGTTGTTGGAATCGCAGCTGTTGCCTTCACTGGATTTGTCCTGATGTTAATTATCCTCAAATTTGGAAGAAACTCAAAGTTTGGAATCAAAGggtttgttttatttcataacAGCCCACAACCATCGAACCCAGGGCCAGAGACACGGTGACCCCACcttgaaagagagggggggccaGAGAGCCAGAGACATGGTGACCCCACccttgcatatatatatatgtaataactCTACCCCAATTCCATGAAATGAACAACAAAAATGGTCAGTTTTATTAGGGTAGGGACAGATCCAAAGCCTGCATTCCACCATCTGAGCTGCGCGGTCACTGTGTCGGAGGTTATCCAATCGACTGGAGGAGTCACTCTGAAACCCTCCCGTAGCAACGCTATGGCCAATCACGTGCCACTTCGCAGGGATACCAGACCTACACTGAACCCGAAAATATTATTAGGACCCGCCTCTACTGCTTTAGCGGTATCCAAAATGGATAGCCATTACagtaacacacattttaactcaacagagagagcaagagaaagaaaGGCTATGAAGAATTTCAAAGCAGTTATGGAGTGTTTATGAAGAGTTATGAAGTGGTTGAATTTGTCAGCTGTGTGTTCCTCTTCATCATCCTCCCTATCTGACTCCGAGTCCCATAGGGGCAAGTCCAGCCAATCAGGGGAGAGATGTGGTGGAATACTCCAGCTAATCAGGGGAGAGCTGTCGTGGGCAAttccagccaatcaggagagagATGTGGTGGAGTACTCCAGCCAATCAGGGTGACATgtggtggagaggaggccaCTTCAGTCCTCCTTGTATGAAGACGTGTAAAGATGAATAATTCAGGACTGAGAGACCGGACTCAGCCTTAACCCACTTCCCTGTCTGATTCCACTCTGTTCCTATGGGAACAGGCGTGGCAGGGTGTGGCTGAGACATCAggggtcaggtgtgtgtgtgtgtgggggttcaTACAAGAAACATACACTTGCCATCTTTCtactgcatctctctctcttgcaatATGCGTACgcagacacacaaatgcatgcacacacacacacacacacacacttatattatattgcatatatattttttggtgccCTTATGCTGGCAGAGCCTGTTAAATGATGAATGCTTGATGGAGGCTCTGCATTAGTAATGGGGGATATTGGTGCTGCTTCCCCCTTCTCTGCTCCTCTGgctcctctctgtctcactgctGTGGCCTCCGACCGTAACCCTGTgcctgtgcgcgtgtgtgtgtgtgcgtgtgtttgcatacatgtgagagaaagagggtctgtgtgtgtgtgtgtgtatgtgagagagagaatgtgtgtgtgtgtctgtgtgtgtgagagagtgctcAACTACATCtgatttttattactttttttattgttaaccACCAAATTATTTTAGCTCCCCAAGGATTATATTTTAATgatgaaaatgtaataataataagaatatagaAATTAGGAGATttgtaaaacaaacacacatttctctctctatcacacacacacactgtctctctctctctctctcacacacacacacacacacacacacactcattctctcgcataaacgtacacacacactttctgttgcatacatgtacacacacacacacacgcacacactcgttCTGtcttaaacacatacacacacacacacacacatactctctctcacagacacacaaacacaaacttgttctctctcatacacatacatactgtatacacacactctctctctctctctctctctctctctctctctctctctctctctctctcacacacacacacacacactcgttctgtctcatgcacatatacacacacccacacttgtGCAGTCCAGAGCAGCTCAGTGGTGTGGGATTCATATTTCATGttctgaaaatatttaaataaggaCATTTGAGGGTCACCGTAGAGACCGTTTCCTTGACTTTAgacatgttttgtttgtttagcacAATCTTCCCAGTTATCTACGTTTATCTTTAACTGTGTTTTGCATATAACTTTGTAGTTATATGTGTAGATTTTACACATCCTTTTGTGCCTAATTCATTTTGATAATTATGATCCAAACCACACCACAggtattaacattatttttttaaggaaatAAAGCACACTTATGAGTGTCTAACTGAATGGAAATTCTAATGTGTATGTTTAATGTAACTTGGGAAGTGTTTTTGATACTcattttcatattaatattgatttagaaaaaagaaagatagaGTACTTTTTGCACAGGATGTACATCTCATTAGATGAAAGGGTAAAATTGGCATTGTATACATTTCCTTTCTTAGACTGATTTAAGACATAATGTACAGACTGGAATGAAGACATAATGTATTGCGTAAGTACATAATTCTAGTTTAACCACATGAACGCAGCgatgtacattttttacttttatggCATTAATAATTAACCGAATTTAGAAAGATGGAGGTAATTCAGCTTCTGTGAGGGAATCTTTGCTGTATATATGAGTCCGTCTTACAGACTTGCCTGTAAAACCTGTTTTGTTAAGAAAGAAGCTGCAATAAAGAACTCGCCCTTCATGACTGCGTTGGGGTACTTTTTGTGGTAGTAGTTAGATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR020455	Family	BDNF/NT-3 growth factors receptor NTRK2	Interproscan
IPR020777	Family	Growth factor receptor NTRK	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005030	Molecular Function	neurotrophin receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-