Gene detail

Detailed information of KAJ8410889.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8410889.1	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	AAFF_1.1_unplaced_25	6314699	6347805	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00188460

Transcript

AAFF_T00188460

ATGCTCACCTTCTCCATCCGGACTAATAACGGCATATCGAATGAATACGAAATAATTGTAAATCTGGGGATTTCCCCAGTTTTGTTGAGCATGAGCATGGAAGATTATGAccacctttttaaaattgtgcTGATAGGAAATGCTGGAGTGGGAAAGACCTGCTTAGTTCGCCGCTTCACTCAGGGCCTTTTCCCACCTGGACAAGGTGCAACCATAGGAGTAGATTTCATGATTAAGACTGTTGAAATCAATGGAGAAAAAGTCAAACTGCAGATCTGGGACACGGCCGGGCAGGAGAGGTTTCGGTCCATCACCCAGAGTTACTACCGCAGCGCCAACGCCCTCATCCTCACCTACGACATCACCTGTGAGGACTCCTTCCGGTGCCTTCCGGAGTGGCTGAGGGAGATTGAGCAGTATGCCAGCAGTGCAGTGGTTACAGTCTTAGTAGGGAATAAAATTGACCTGACGGAGAAGAGGGAAGTTCTcagggagagagcggaggagttTGCGGAGGCCCAAAGCATGCTGTATTTGGAGACCTCCGCCAAAGAGTCCGACAATGTGGAGAAGCTCTTCCTGGACCTGGCCTGTAAACTGATCCGCGAGGCCAAGCAGAACTCGCTAGTCAACAACGTCACGTCCCCGATGCCTGGGGAGGGAAAGACAACACAACTGCTATATAGACAGGGAGGTTTAAGTCATACCATTTCAAACAGCCTCTCCTATAAGACCTACTATTTTGAGCAGAAGATTGATCACTTTGGATTTCTTGGTAATGGCACATTCAAGCAGAGGTACCTCCTCGATGCTCATCATTGGCACAAAGAGAATGGCCCGATCCTGTTCTACACTGGGAATGAGGGCGACATCACTTGGTTCTGCAATAACACAGGTTTCATGTGGGATGTTGCGGAGGAACTGGGAGCCATGTTGGTGTTTGCGGAACATCGGTACTATGGAGAATCTTTGCCATTTGGACAGGACTCTTACAGTGATGCCAAGCACCTAAACTACCTGACGTCGGAGCAGGCGCTGGCTGACTTTGCTGTGCTGATCAAGTCGCTGAAGAGCACGATCCCAGGAGCCAGGGACAGCCCGGTGATTGCCATTGGAGGATCGTATGGAGGGATGCTGGCAGCCTGGATGAGGATGAAATACCCCCACATTGTCAGTGGTGCCCTGGCTGCCTCTGCTCCCATCTGGCAGTTCACAGACATGGTGCCGTGTGGCGTCTTCTACCAGATCGTAACCCAGGATTTCCGCAGCAACGGGGTGGGCTGTGCAGAGAGCATCCAAAGATCATGGAAAGCTGTTGACAATATGTCCTCCACAGTTGAAGGTCTTCAGTGGCTGTCCAGTGAGTTTGGTCTCTGTATCCCTCTGAAAGTAAAAGAAGAAGCAGCGGTTTTAAAGTCCTGGCTGCAGgagacatgggtgaacttggcTATGGTTGATTACCCATATGCGGCCGACTTCCTTCAGCCGCTTCCTAGGTGGCCAATTAAGGTTGTATGTCGGCACCTTACTGACTCTACAGCGCCGGACGAGCAGCTGCTGCATGGAATCTCCCAGGCTGTGAAGGTGTACTACAACTACACAGGAAGTGCACAGTGTCTCAACATGTCTCAGACTGCCACCGGAAACCTGGGCTACATGGGCTGGTACTATCAGGCCTGTACCGAAATGGTCATGCCTATGTGCACGGATGGCATCCAGGACATGTTTGAGCCCCAGGCGTGGGATTTCATGGCCTTTTCCGAGGAGTGCCAGGCACTGTTTGGAGTGAGGCCGCGATCCGACTGGGCTGACACGGTCTATGGAGGAAAGAACATCAAGTCCCACAGCAACATCGTCTTCAGCAATGGCGGCTTGGACCCCTGGTCGGGTGGTGGGGTGACCAAAAGCCTATCGGACTCCCTGGTGGCCATCATGATCCCAGAGGGGGCCCATCACCTGGACTTGCGCTTCAACAGCAACTTCGATCCCCAGTCCGTCCTGAATGCCCGGGCCATGGAGCTGAAGTACATCAAGCTGTGGATCCAACAGGCTGCAGAAAACACCCTATGACCCCCTCGTGACCTGGGGCCATGCCCACTGCCCCCTAACTCCAGTATCTTAGCCTCCTAAACCTACGCTACTATGAACCTAACCAGGTTGACACTCTGGTGtgaaatactgtatatccaCCTACATTCCcaggatgtgctttgctaataaaccaatgacCAGTTACTTCTTCTGACTAATCAAGACCCTGTGTAGGTGGGACTCCAGTTGTAGGCAGTTGTTTAACTCTGGCTAAAACTTGGTAaagccaatcagattgcaggaaatgAATCTCACAAACTGTGTAACTTCCCTTTCAAGACTACAGGTATCCTAACCTCATGTTTCATTGATATTGATGCTGTCAGGATCTCTTGGCTTTTTCTTTCTCGTTTtcagaaattgtgtgtgtgatccTTGCTGTCAGGTCTTCTGGAGGGTACCAAGCTCTCAGTATTTGAGTTGactaatttgaaacaaatttgaTCAAGTCATTGACAAcgttattattcttatttttttgtagtAGTAATCAGGTGttgttcattttcatgttttcactTGGTTTACATAGTTGCGCATATCTAAATTAGAAAGATGTGAACATTTTCTAAATTGCATTACAGCTTTAGACCGGGGTAACCATACCAAATGATATGTTTGAATGTTATCTTCAGGGAAAttgttttttagaaaatgaaATCAACAAAAGTTTTACAATTCAGTCAGGCATTTGGCTGTGAATGTGCATATAGGTTTAGACATACAGGATATAGAATATATGCCTacctacttaaaaaaaaattgtaattctgagtgaacattttttttctattctGTTCTGTGtcatttttgtatttctgtATGAGCTTCAAATATGACGTTCATTTTCATGAGCACTTGGGGCTGGACCCAACAAATGTTTTTTACGCAATTTGAAAAAATAGAGAAAATGTGGTATTCTGACAGATGAGCACTGTGATTAAAAGAACCAATTTTCCTCTTGTTCGCCTgttgaattcattcattaaagattGATACAGTGTTAAATTaacattgtatttattcatcttAAAATGATGTGTTATTCTGGTGTCTTCCTTCTGGGTGCTTTATAAATTGTATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF05577	Peptidase_S28	Serine carboxypeptidase S28	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR008758	Family	Peptidase S28	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR041820	Family	Rab30	Interproscan
IPR042269	Homologous_superfamily	Serine carboxypeptidase S28, SKS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11010	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003085	Biological Process	negative regulation of systemic arterial blood pressure	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008239	Molecular Function	dipeptidyl-peptidase activity	Interproscan
GO:0032482	Biological Process	Rab protein signal transduction	Interproscan
GO:0043535	Biological Process	regulation of blood vessel endothelial cell migration	Interproscan
GO:0060055	Biological Process	angiogenesis involved in wound healing	Interproscan
GO:0070008	Molecular Function	serine-type exopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-