Gene detail

Detailed information of KAJ8409920.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8409920.1	LD33804P	AAFF_1.1_unplaced_28	1377929	1455263	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00209610

ATGAACATCACAGGCTGCAACAAAGAGGGTGTGCGCTGTGCTGAAATGTCTATGGTCTGCCTTACTGACTTTGAAGAGTATGCTAAGGAGCATCTCTCCAAGGCCACCTGGGACTACTACGCAGCCGGAGCGGATGAGTGTTGCACCAGGGATGACAACTTGTTGGCATACAAACGAATCCGACTGCGGCCGCGGATCCTGCGGGACGTGTCCATCAGTGACACCAGGACCACGGTGCAGGGCACAGAGAtcagcttccctgtgggcatcGCGCCCACTGCCTTCCACTGCCTGGCCTGGCACGAGGGCGAGGTGGCCACCGCACGAGccacagaggcagtgaacacctgttACATAACCAGCACATACTCGACATGCTCCGTGGAGGAGATTGTTGCCGCGGCGCCTAATGGGTACCGCTGGTTCCAGCTATATGTGTACCGTAACCGCAAGGTGTCAGAGCAGATTGTGCACCGTGTGGAGTCGCTCGGCTACAAGGCCCTGGTCCTCACCGTGGATGTGCCATACACTGGGAAGCGCCGCAATGACATCCGCAACCAGTTCAAACTCCCGCCACACCTCAAGGTCAAGAACTTTGAGGTAAAGGAGAACACTGGCCCTGAGGAGTACGGGATCCCTGCCAACACCCTGGACCCCTCCATTAGCTGGAAGGATGTCTATTGGCTGCAGTCCCTCACCCGCCTGCCAATCATCATCAAGGGCATCCTGACCAAGGAAGATGCAGAGCTGGCAGTGGAGCACGGGGTGCAGGGCATCATCGTGTCCAATCACGGCGGCCGGCAGTTGGATGGAGGCCCTGCCACGatAGATGCGCTGTCTGAGATTGTGGACACGGTTCAAGGCAGGATCGAGGTCTACCTGGATGGGGGGATCCGGACGGGGAGTGACGTCCTGAAGGCCGTGGCCCTTGGAGCCAAGTGTGTTTTCATTGGCAGGCCGGCAGTGTGGGGCCTGGCTTACAAGggcGAGGAGGGAGTCAGGGAGGTGCTGCAGATCCTCAACGATGAATTCCGTCTGTCCATGGCACTCGCCGGCTGCAGGAACATTGCTGAGATTAACAGGAACCTTATTCAGAGCAGTGGGGAAGAGAGCAAGCAGAACCGGAGTCTGTCCCGCATAGTAAGCAGGGGGTCACTGAGAGAGCCCCCAAAACCCCCCACCCAGACCACTAAACCCCCTGCCTCAGCCAACAACCTCCCCGAACTGACCCCAAAGCCTCCCGTTCTTGCCCCCAAACCCAATACCAGGGTGTTCAGCAGCAATGAGCACGGATTCGCCATCCTGCAGGGGTTTGAACACTTCCGGTCTGATGAATCCCTATGTGACGTTACTCTGGTGCCAGATGACAGCAGTGAATCTTTCCAAGTCCATAGAGTCATTATGGCTTCAGCCAGCGACTATTTCAAGGCCATGTTCACAGGCGGGATGagagagcaggagcagaagGTGATTAAGCTGCATGGGGTGAGTGTGACAGGCCTGAGAAACATCATTGATTTCATCTACACCGGCCGTGTCACCCTGAGTCTGGGCTGCCTGCAGGACACCCTGGAGGCCGCCAGCTTCCTGCAGGTGCTGCCTGTCCTTGGTTTCTGCAAGGAGCTGCTGAGCAGTGAGGTCACTATAGAAAACTGTGTGGAGGTGGGCCGCATCGCCAGCGACCTCCTCCTGGAGGAGGTGCAGACCTACATCAATGGGTTTGTCTGCCAGAACTTCTCCGAGCTGGTGAACAGCAAGAAGCATCTGCTACTCTCTGAGACCAGCATGGCCTACGCCCTCTCCAGCGACTCCCTCAAGGGCTTCTCTGAGATGGAGCTGTTCCGAGTGGCCCAGGCCTGGCTGGAGCATGACTCCGCCACCCGCAGCCCGCACACCTACACCCTGATGAGGTGCATCCGCTTCCCCCTCATGAGCCCTGCTGAGCTGCTGCAGATCTCCCAGGAGGACGACGGCACCCTGAGGGCCGACACAGCCTGCGTCAACCTCCTGTTGGAGGCCAGCAACTACCAGATGATGCCATACCTGCAGCCCGCCCTGCAGACGGAGCGCACACAGATCCGCTCCGACTCCACCCACCTGCTCGCACTGGGCGGGGTCATACGGCAACAGCTGGTAGTCAGCAAGGAGCTGAGGCTGTACGATGAGGAGGCCCAGGCCTGGCGGGCCCTGCAGACCATGGATGTCCCCCGCTACCAGCACGGCGTGGCGCTGATCGGCAACTTCCTCTATATCGTTGGTGGCCAGAGCAACTACGACACCAAGGGCAAGACAGCAGTGGACAGCGCATACCGCTACGACCCTCGCTTCGACAGGTGGCTGCAGGTGGCCTCGCTCAACGAGAAGAGGACCTTCTTCCACCTCAGTGCCCTGAAGGGGAAGCTGTACGCCGTGGGGGGCAGGAACCCTTCAGGCGAGATCGACACTGTTGAGTGCTACAACCTCAGTAAGAACAAGTGGACGTTCATGTCACCAATGACAGAGCCGCACTATGGGCATGCTGGGACAGTCCATGGGGAGCTGATGTACGTGTCAGGGGGAATCACGCGGGACACCTTCCAGAAGGAGCTGTCATGTTATGACCCTGAAACAGACAGCTGGAGCCGCCGAGCGGACATGACCACTCTCCGCGGCCTGCACTGCATGTGCACGGTCGGGGACCGCCTCTACGTCATGGGCGGGAACCACTTCCGCGGGACCAACGATTATGACGACGTGCTAAGCTGTGAGTTCTATAGCCCCGATGCGGACCAGTGGACTGACGTCGCGCCCATGCCGCGGGGCCAGAGCGACATGGGCGTGGCCGTCTTCCGGGGCCAGATCTACGTGGTTGGGGGCTACTCATGGAACAGTCGGTGCATGGTGGACATCGTGCAGCGTTACGACCCCAAGCGGGACGAGTGGGAGAAGATGTTCAACGTGCTGGAGCCTCTGGGTGGGATCCGGGCCTGCTCCATGACGCACCACCATGGAAACAGCAATTTCTTAATGACAACACAAAGGATAAACCTACTTAAACATAGACCAGCCTGGGACCCAGTCCAACCTTTCATCATAACTGGGGTTGCCCAACATGCGGTCAGCTTGTGCGCCTGCGGGTTCCTGGGACAGAGAATCGCCAGGCTGTTCCTGGAGGAAGAGCAGGGGCTCACCGAGATCCGTCTGCTGGACAAGAATGTCAAGCCTGAGCTCATCCAGTCGCTAGAAGCATGCACAAGTCAGACGAAAGTGACCGTGATCGAGGGGGACATCAAGGACAGTGAGCTGCTGAGGAGAGCCTGTCGGGGGGCGTCCCTGGTTGTCCACACAGCGTCCATCATTGACGTCACTGGGGCCGTGGAATACAGTGAACTCCATGGGGTTAATGTGAAAGGGACCCAGCTCCTTCTAGAagcctgcatccaggagagcgTGCCGTCCTTCATCTACACCAGCAGCATCGGGGTGATGGGCCCCAACCCACAGGGCGAGCCCATCATCAACGGCGACGAGGACACCCCATACCCCTCCCGCTTGAAGTTTGACTACAGCAAGACCAAGCTGGAGGCAGAGCAGCTGAGCTTGGGGGCCCACGGGGAGCTGCTACCAAACGGGAGCCGGCTGGCCACCTGCATCCTGCGGCCCATGTACATCTACGGAGAGGGCAGCCGCTTCCTGCTCTCCCACATGAGCAACGGGATCCGCAACGGGAACATGCTGCTGCGCACGTCCCGACGCGAGGCCACCGTCAACCCCGTGTACGTAGGGAACGTGGCCCTGGCCCATCTCCGTGCCGCGCAGGCCCTGAGGGACCCCCAGAGGAGGGTGGCCGTCGGGGGAAACTTCTACTTCATTTCGGATGACACGCCGCCCATCAGCTACTCGGATTTCACCCACGCAGTGTTGTCACCCCTCGGGTTCAGCATCCAGGAGAGGCCTGCTCTGCCctttcccctcctcttcctcctggccTTCCTCCTGGAGGTTCTCCAGAATCTGCTCCGTCCTTTCCTGCGGTTCAGGCCACCCCTGAACTACCAACTTCTCGTCATGGTGAACACCCCCTTCACATTCTCTTACCGCAAGGCCCAGAAGGACATGGGCTACACCCCTCACTATGGCTGGGAGGAGTCACGCAAGCGCACCACTGATTGGCTAACCTCCCTCCTGCctatgaagagagagaaaatcaaGGCTCACTGA

Transcript

AAFF_T00209610

GTTTACAGTGTTTCACATTTAGGATGTTTATGTTAGTGGAATGTGCAATTAAAAGTATGTACGAACACTATATGTATCTGTGCTTTATCGTGAACTCCCAGGATTTGTGCTTGCCCAATCAGCGTCCAGGACCAGAACTATCGGTTTTGAAAAGGGTTAATAAGGCAAATTGTGCTAGCTACCAATTAGCACACTAGCTATATAGATAAGGAAGACAGACAGCTAATGCAGATGCATTCAACTGGCAACGTTAAAATTGAGTTGCCAGAGACAGCTGGGTGGACTAAGGACGTTATTAGCAGCTGGCTAGCACAGGTTATGACTTTTCTCAGAGAATCTTAAATCCACAAAGAGAGAATGAACATCACAGGCTGCAACAAAGAGGGTGTGCGCTGTGCTGAAATGTCTATGGTCTGCCTTACTGACTTTGAAGAGTATGCTAAGGAGCATCTCTCCAAGGCCACCTGGGACTACTACGCAGCCGGAGCGGATGAGTGTTGCACCAGGGATGACAACTTGTTGGCATACAAACGAATCCGACTGCGGCCGCGGATCCTGCGGGACGTGTCCATCAGTGACACCAGGACCACGGTGCAGGGCACAGAGAtcagcttccctgtgggcatcGCGCCCACTGCCTTCCACTGCCTGGCCTGGCACGAGGGCGAGGTGGCCACCGCACGAGccacagaggcagtgaacacctgttACATAACCAGCACATACTCGACATGCTCCGTGGAGGAGATTGTTGCCGCGGCGCCTAATGGGTACCGCTGGTTCCAGCTATATGTGTACCGTAACCGCAAGGTGTCAGAGCAGATTGTGCACCGTGTGGAGTCGCTCGGCTACAAGGCCCTGGTCCTCACCGTGGATGTGCCATACACTGGGAAGCGCCGCAATGACATCCGCAACCAGTTCAAACTCCCGCCACACCTCAAGGTCAAGAACTTTGAGGTAAAGGAGAACACTGGCCCTGAGGAGTACGGGATCCCTGCCAACACCCTGGACCCCTCCATTAGCTGGAAGGATGTCTATTGGCTGCAGTCCCTCACCCGCCTGCCAATCATCATCAAGGGCATCCTGACCAAGGAAGATGCAGAGCTGGCAGTGGAGCACGGGGTGCAGGGCATCATCGTGTCCAATCACGGCGGCCGGCAGTTGGATGGAGGCCCTGCCACGatAGATGCGCTGTCTGAGATTGTGGACACGGTTCAAGGCAGGATCGAGGTCTACCTGGATGGGGGGATCCGGACGGGGAGTGACGTCCTGAAGGCCGTGGCCCTTGGAGCCAAGTGTGTTTTCATTGGCAGGCCGGCAGTGTGGGGCCTGGCTTACAAGggcGAGGAGGGAGTCAGGGAGGTGCTGCAGATCCTCAACGATGAATTCCGTCTGTCCATGGCACTCGCCGGCTGCAGGAACATTGCTGAGATTAACAGGAACCTTATTCAGAGCAGTGGGGAAGAGAGCAAGCAGAACCGGAGTCTGTCCCGCATAGTAAGCAGGGGGTCACTGAGAGAGCCCCCAAAACCCCCCACCCAGACCACTAAACCCCCTGCCTCAGCCAACAACCTCCCCGAACTGACCCCAAAGCCTCCCGTTCTTGCCCCCAAACCCAATACCAGGGTGTTCAGCAGCAATGAGCACGGATTCGCCATCCTGCAGGGGTTTGAACACTTCCGGTCTGATGAATCCCTATGTGACGTTACTCTGGTGCCAGATGACAGCAGTGAATCTTTCCAAGTCCATAGAGTCATTATGGCTTCAGCCAGCGACTATTTCAAGGCCATGTTCACAGGCGGGATGagagagcaggagcagaagGTGATTAAGCTGCATGGGGTGAGTGTGACAGGCCTGAGAAACATCATTGATTTCATCTACACCGGCCGTGTCACCCTGAGTCTGGGCTGCCTGCAGGACACCCTGGAGGCCGCCAGCTTCCTGCAGGTGCTGCCTGTCCTTGGTTTCTGCAAGGAGCTGCTGAGCAGTGAGGTCACTATAGAAAACTGTGTGGAGGTGGGCCGCATCGCCAGCGACCTCCTCCTGGAGGAGGTGCAGACCTACATCAATGGGTTTGTCTGCCAGAACTTCTCCGAGCTGGTGAACAGCAAGAAGCATCTGCTACTCTCTGAGACCAGCATGGCCTACGCCCTCTCCAGCGACTCCCTCAAGGGCTTCTCTGAGATGGAGCTGTTCCGAGTGGCCCAGGCCTGGCTGGAGCATGACTCCGCCACCCGCAGCCCGCACACCTACACCCTGATGAGGTGCATCCGCTTCCCCCTCATGAGCCCTGCTGAGCTGCTGCAGATCTCCCAGGAGGACGACGGCACCCTGAGGGCCGACACAGCCTGCGTCAACCTCCTGTTGGAGGCCAGCAACTACCAGATGATGCCATACCTGCAGCCCGCCCTGCAGACGGAGCGCACACAGATCCGCTCCGACTCCACCCACCTGCTCGCACTGGGCGGGGTCATACGGCAACAGCTGGTAGTCAGCAAGGAGCTGAGGCTGTACGATGAGGAGGCCCAGGCCTGGCGGGCCCTGCAGACCATGGATGTCCCCCGCTACCAGCACGGCGTGGCGCTGATCGGCAACTTCCTCTATATCGTTGGTGGCCAGAGCAACTACGACACCAAGGGCAAGACAGCAGTGGACAGCGCATACCGCTACGACCCTCGCTTCGACAGGTGGCTGCAGGTGGCCTCGCTCAACGAGAAGAGGACCTTCTTCCACCTCAGTGCCCTGAAGGGGAAGCTGTACGCCGTGGGGGGCAGGAACCCTTCAGGCGAGATCGACACTGTTGAGTGCTACAACCTCAGTAAGAACAAGTGGACGTTCATGTCACCAATGACAGAGCCGCACTATGGGCATGCTGGGACAGTCCATGGGGAGCTGATGTACGTGTCAGGGGGAATCACGCGGGACACCTTCCAGAAGGAGCTGTCATGTTATGACCCTGAAACAGACAGCTGGAGCCGCCGAGCGGACATGACCACTCTCCGCGGCCTGCACTGCATGTGCACGGTCGGGGACCGCCTCTACGTCATGGGCGGGAACCACTTCCGCGGGACCAACGATTATGACGACGTGCTAAGCTGTGAGTTCTATAGCCCCGATGCGGACCAGTGGACTGACGTCGCGCCCATGCCGCGGGGCCAGAGCGACATGGGCGTGGCCGTCTTCCGGGGCCAGATCTACGTGGTTGGGGGCTACTCATGGAACAGTCGGTGCATGGTGGACATCGTGCAGCGTTACGACCCCAAGCGGGACGAGTGGGAGAAGATGTTCAACGTGCTGGAGCCTCTGGGTGGGATCCGGGCCTGCTCCATGACGCACCACCATGGAAACAGCAATTTCTTAATGACAACACAAAGGATAAACCTACTTAAACATAGACCAGCCTGGGACCCAGTCCAACCTTTCATCATAACTGGGGTTGCCCAACATGCGGTCAGCTTGTGCGCCTGCGGGTTCCTGGGACAGAGAATCGCCAGGCTGTTCCTGGAGGAAGAGCAGGGGCTCACCGAGATCCGTCTGCTGGACAAGAATGTCAAGCCTGAGCTCATCCAGTCGCTAGAAGCATGCACAAGTCAGACGAAAGTGACCGTGATCGAGGGGGACATCAAGGACAGTGAGCTGCTGAGGAGAGCCTGTCGGGGGGCGTCCCTGGTTGTCCACACAGCGTCCATCATTGACGTCACTGGGGCCGTGGAATACAGTGAACTCCATGGGGTTAATGTGAAAGGGACCCAGCTCCTTCTAGAagcctgcatccaggagagcgTGCCGTCCTTCATCTACACCAGCAGCATCGGGGTGATGGGCCCCAACCCACAGGGCGAGCCCATCATCAACGGCGACGAGGACACCCCATACCCCTCCCGCTTGAAGTTTGACTACAGCAAGACCAAGCTGGAGGCAGAGCAGCTGAGCTTGGGGGCCCACGGGGAGCTGCTACCAAACGGGAGCCGGCTGGCCACCTGCATCCTGCGGCCCATGTACATCTACGGAGAGGGCAGCCGCTTCCTGCTCTCCCACATGAGCAACGGGATCCGCAACGGGAACATGCTGCTGCGCACGTCCCGACGCGAGGCCACCGTCAACCCCGTGTACGTAGGGAACGTGGCCCTGGCCCATCTCCGTGCCGCGCAGGCCCTGAGGGACCCCCAGAGGAGGGTGGCCGTCGGGGGAAACTTCTACTTCATTTCGGATGACACGCCGCCCATCAGCTACTCGGATTTCACCCACGCAGTGTTGTCACCCCTCGGGTTCAGCATCCAGGAGAGGCCTGCTCTGCCctttcccctcctcttcctcctggccTTCCTCCTGGAGGTTCTCCAGAATCTGCTCCGTCCTTTCCTGCGGTTCAGGCCACCCCTGAACTACCAACTTCTCGTCATGGTGAACACCCCCTTCACATTCTCTTACCGCAAGGCCCAGAAGGACATGGGCTACACCCCTCACTATGGCTGGGAGGAGTCACGCAAGCGCACCACTGATTGGCTAACCTCCCTCCTGCctatgaagagagagaaaatcaaGGCTCACTGACTGTCCCTGACCCCACCTTTGAAAATATTACAAGACATAAtctgcttgttttttatttcattatgtcTGGTTCAAGTGTTG

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	ZBTB
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan
PF01070	FMN_dh	FMN-dependent dehydrogenase	Domain	Interproscan
PF01073	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	Family	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF07707	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF13964	Kelch_6	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR000262	Domain	FMN-dependent dehydrogenase	Interproscan
IPR002225	Domain	3-beta hydroxysteroid dehydrogenase/isomerase	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR008259	Active_site	FMN-dependent alpha-hydroxy acid dehydrogenase, active site	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR011705	Domain	BTB/Kelch-associated	Interproscan
IPR012133	Family	Alpha-hydroxy acid dehydrogenase, FMN-dependent	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR037396	Domain	FMN hydroxy acid dehydrogenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003854	Molecular Function	3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006694	Biological Process	steroid biosynthetic process	Interproscan
GO:0010181	Molecular Function	FMN binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0031463	Cellular Component	Cul3-RING ubiquitin ligase complex	Interproscan
GO:0032465	Biological Process	regulation of cytokinesis	Interproscan
GO:0097602	Molecular Function	cullin family protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-