Gene detail

Detailed information of KAJ8406665.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8406665.1	THYROTROPH EMBRYONIC FACTOR RELATED	AAFF_1.1_unplaced_42	952572	960067	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00295810

ATTGGCTTAAAGTATTTGTGTTGTATTCGGAGGTTGCTCGTGTTGAGCCGTGTGCGGGACTTgcttaaattaaaatgacatataAGCCAACTGAAAACCATGGAAATTGCCCTATTTTGTCTTGATGAATGGCATTTATCCCCAAATGTTTCATATCTCTTTTACAAAATGATGGTTAAGCGTGGCAATATTGATAGTTTACTAACCTACTCAAGTGTTAATGCGTACCAGTGTCAGATGGGATCACTACTTCGTGAGCTGCCAAAAGTGAAATGATTCTCTGTTTACACAGTATTGAATATATAGCCTCACCGACCAATGGGTTTTCAGAGCACGGATGGGTACTCCTTCGCAGACTGAACGTTTTGTAACGATACATGTTAATATTCATGTGTTACTGGTAGCAGTAGCTACATGCCGGCATTGGTGAGTCGGAAGAGGGCGGTCTCTCATGAATAGCAAAACATTGTTGAACAGCGATCCAGGGAACTGGGTCACACAGACGAATGCGAGGAGCAGTGCGACTTGACATTTTGGCATGGTTAACCGAAGCTGACAAGGATTATACAAACGGGAGTAACAACGTTGgtttaaataaagtttacaCAGCGGAGAGCATTGGAGGTTTGCGCCTTGTGGCCGTGGGCAGTATTATACAGCGAATCTCCGTTTCTGCGAGATAACTATAGCGAGGACctattttaatatacagtacacatgtCTGGGGAGGCGACGGTCACGGCCATCCTGGACTCCGGTCCACGGAGTTCGTTTCCCGTTGTGTTGAAGAAGGTGATGGAAAATCCACCGCCGAATATACTCGAAGAGAGCAACGACGGGAAGGACAAAGACAAACTGTGCGAGACTGACGATGGGGACActggtggaggaggaagaggaagaggaggaggaggaagagggggcaGCGGTGGCATGGGACCGTCTGCCTCCCTGACTCCCGCCATCTGGGACAAGACCATCCCGTACGATGGGGAGACCTTCCACCTGGAGTACATGGACCTGGACGAGTTCCTGCTGGAGAACGGCATCCCCGCATccctggaggaggagctgcagaAGACCCTGAGCAAGGATGACCCCGCCCAGGGGGAGACGGACGCCCCGACGCCGCACGCACCCCTGTCCACGGTCAGCCTCCTGCCCACCATGCAGCTCGATCACGAGGAcgacgaggacgaggaggaggaggacgaggacgaggaggaggaggagctggtgaCCCTAACCGTGTCTGAAACGGGCAGCACCGCCGCAGAGCAGAGCAGTACAGAGGGGGGTGATGAGAAGGACCCGATCGATCCCGACGAAATTGAGGTGAACGTGAACTTTGAGCCGGATCCGACAGACCTGGTGCTGTCCAGTGTGCCGGGGGGAGAGCTGTTCAACCCGCGCAAACACCGCTTCTCAGAGGAAGAGCTCAAACCGCAGCCCATGATTAAAAAGGCCAAGAAGGTGTTCGTACCCGAGGAACAGAAGGATGACAAGTACTggcagaggaggaagaagaacaaCGTTGCGGCCAAGCGCTCACGCGACGCCCGTCGGCTCAAGGAGAACCAGATAACGGTGCGGGCCGCCTTCCTGGAACGGGAGAATTCGGTGTTGCGGCAGGAAGTGGCCGAACTGCGCAGGGACTTCGGCCGCTGCAAGAACGTGCTGACCTCTTACGAGGCCAAATATGGAGAAATGGAGCCATTgcagacagaggaggaggaggagctgtaaggatttattaatttattgatttatttgtggCGAgggtgaaataaatgaataaatgaataaaggagTGGCGATGGCCTGTTGGATCAGAGGCAGAAACGGAGGAGGTGGAAGACCAACTGTGACCGTGGGGGAGCATGAATGAGTGAAACAAGGCGTTAAACAGctgtttcaattattattattattttttacttctgCTCAcacctttctgtgtgtgtgtgtgtgtgtttgtttgtttgtttgagagagagagcgagagaatggTTGTACAGCTTCCCTTGTATATAAACAAGTCACAATGCACCAAATGGATGGATGTCAATGCTTTGTTTTCTCATCAAATGTAAATCGGACGATTGACAGTGATGATTAAAGTCGAGAGATAAAGTAAATTTTTACTGTGACAGAGAGGGACTTAAATATGACCCACCTAAAAGCATTTGttttgtaaacaaaaaaaatgcagtaACTTTTTATTCATATGTAATTGTAAACATGATTGCTCTGGGTTTGTTCCCACAAGTTTGACAAGGAATCTGGTGGGCATCGATTTTCCACAATATCCGGTGTTAAAGTGGATTAAGTCTGACATAAGTCTCTTTTTTTATTAGACACATTGCTAGTAATGGAACAGTCCACCCCTGGAAGGAGTCAAGTTTAATCACTTAAGCAAAGCAGACTCTGCAGTCTGAGACCTGTTATTTCAATCTTGCTGACATATACCTCATGTACACTTGTGTCACATACAGTGCCGCTGCTTCTAGACCAGCGGTACCGTGGCCACGTTGTCCGTCATCAGGCATAAGCGGTGaataattttcatatttaaatccTAGGCAAGTTACAAACGTTTTTggtccaaaaaaaacattttcatcttttATTGTTAAGGGCATGtgcttttcaccacctctgtgaggaacctgcagttccgtcctccaacaccaagaggtcgatggaggactttctgaagctacttgttaagcaatcaccgcattacaatctcaagtaatcattcaattaccacaaatgaggtgcgtattgcaaTGTCGTAGACTAGTCAGTAGTTGGCGCTGcagacacccacacataatcacactgattgatttgtaagtaggctactgctttcaattgtaaaAAGACTCAGTTCAGGGAGtgcaatatttcatattttggtgttgaattgaatcattctcaaataatttgttgtttcctctttcatgacttgtcatagaggtgtaaaaacttatCCAAAATGGAAACTCCcctctgaaacaacgtcaatttgtagacttgcgccaacactcagattggaacttaattgtataattggtcatgttaatttgagtaattgccacaaATGACTGAAAATAGTGCCTACGGTGGATcaaaaaggaactgcagcttcttgagagaagtgaaaaacgcatgcccttattTATGATAAACTATTTGTCCTTTACGCACATTGGTATTCAACTTGACTGAAATTTTGGTTTATATATCAAGCCCTTGAATTTATCTCACATTTTCTGGGATGTATATGTTTATTTGTagatgtatatacatatatatatattaaatattatctTGAACCTACCAGAAAGTGTAATATATCAAATTCTTTAACAGCAGAaggaatttattttttcataagcACAGAGTACAGTGCATTCGAAAGAGTTCAGTTTGGATGAGAGACCAGACCGTGGCCTGGAGAGCCTGGGCGTTGCAGTGGTGGTGACGACAGTCTCACGGTCACAATTTTAACCAGGTTAACCAGGGCCCAAACCTTCAAGTGTCTTCAGCCAACTCGGTCTGCCTGTTTACGAGGTTACGATCACAACATATCAGACTCCAAATAACTCTTATCAGGGTcctttcaccttttttttttttactgtaaaactTTCCTTCGTGTTACGTTCCTACCTAGCACCTCTCTTGATGAGAATAGTCTTGTCATGATTCTGaaacagtaacatgtttttgtcaCACCTGGAAAAAAGGTTGTTAAAGTGCAATTACAGTGCTTCTAGGCTAGATCACCTGTTAACTAGCAGCATGTATAGCTATAAAAAAGAAGTGTTATTTACAATTCATGGCAAGGGCATTTGTGTAGTGTAAAAATCAAAATGAGTGCCTGAACAAAACACATTGTCATACTCTTTACTTTGGCcattaattgcaatttagaAAGTGTGGAGGAATTTGGAGAAATTCTGAAagcaagaaagaaaagaaacggATTGCCCGGCTGGTAATAATCACAGATCACTCTCACAACAGTGACTGGGTTCTGTTTGTACTCAGAAAAAGGGATTCATGTTGGCTACCAGAGACATGCAAAACAAAGAACATCGGTTTAAATTGGATAAATTGGGCCTTTATCCACCATGGTATTAGCCGTTTTCAAATCCAGAGTTTTTACCCAATCTGGATTTTTGACTATACAATGTGCTAAAAGTTTACCATGGTGGTTTTCCTGGTCAGCCACTGAGTTTCTTGAAGACGTAATTGATCTGCTCCGTGCTTAAGTGCTTCGTCAGAGTCACACTGGGGTCACTGCAAGGCTCCTGAAGCCTCACTGTATACAACAGAAATCACTGTGGTTTCCCTACAGCCTCAATATGTGTAGCTGTCAGTCTTCTTTTATCCTTTCTGACCATGCAGCAGCTGTAAAATGTTGTCTCTACATTTATACAATGttatttatcattaaaaaatttAAGACCAGCCTTTGAGGTTTTGTTTGATCTTATTGTGATTGTATTCTGTAC

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	TF_bZIP
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07716	bZIP_2	Basic region leucine zipper	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR040223	Family	PAR basic leucine zipper protein	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11988	THYROTROPH EMBRYONIC FACTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-