Gene detail

Detailed information of KAJ8405804.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8405804.1	DACHSHUND	AAFF_1.1_unplaced_46	2321519	2477301	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00312410

GGCTGATTGAAACAGTGAATGCATCGCTTCTCAGTTTCGCCACCACACTTGCGGGTAAGGTAGTAGCCTATTGCCTACTATCCGGCGCGAGAGAGTGTGCATGACAAACAGCAAGAGAGAGTAaaacaggagagaggagagagaaaagcacaagcgggagagaggaaaggaagAAACTCAAGTGACTATGGCCGTATCAGCAACTCCCCCGGTGCTCTCCCCCACATCCACCCCAGGCTCCGGGGGCTTATTCCGCTCCGATCCCCTGTACACGAGTCCTGCCGAGTCGCCGAGGCTGACCACCAGCATGATCAACACTTTCATCAGCAGCGGAGGAGGCGGTGGCGGCAATGGGAACGGCCCCAGTGGCAATAACGAGTGTAAAATGGTGGAGGTCCACGGGGTCAAAGTTGCCTCTTTCAGTGTGGACGGGCAGGAGCTGATCTGCCTGCCGCAGGTTTTCGACCTCTTTCTGAAACATCTGGTCGGTGGGCTGCACACTGTGTACACCAAGCTCAAGCGCCTGGATATATGTCCCGTCGTGTGCACCGTGGAGCAGGTCCGGATTCTGCGGGGTCTCGGGGCTATCCAGCCCGGGGTGAACCGCTGCAAACTCATCACCCGAAAAGACTTCGAGGCGCTGTACAACGACTGCACCAATGCCAGCTCCAGGCCGGGCCGCCCTCCGAAGCGCTCCCTGGGGGTGGGTCTGCAGGAGAGCTCCCGGCTCCTGCCTCACAGCGTGCACGGCCTGCTCTCCCCCGGGCTGCTCTCCCCCACAGGGCTGACAGCAGCGGCCATGGCGGAGGCCATGAAACTACAGAAGATGAAATTGATGGCCATGAATAACCTGCATGGAGCTGGCAGCCAGAATGGCACCGAGTCCGAGAATGAGGAGCTCAACTCCAACACAGGTGGCAGTGAGTCCTCCTGGGATAAAGACAAGCTGCAGTCCCCCCCCACACCCGTTGCCCAGCACAGCCTGGCCCACGCCGGCCTATCGGCTCAGCACAGCCTGTCTGCCTCTCACTTCAGCTCCCTACAGCAGAGCCACCTGCTGGCAAACCAATATTCGTCTCTGCTGGTGCCTATAACAGGGCTGCAGCCGCGCGTGTGTTATGCGTCGCGTCTGTATGAAGCACAGACTGATCATTGCAGACTCGACCTGCCGTTCATGATGATGCCACACCCCCTGCTTCCTGTCAGCCTGCCGCCTGCATCGGTTGCCATGGCGATGAACCAGATGAACCACCTGAACACGATTGCGAACATGGCCGCTGCCGCCCAGATGCACAGTCCCCTGTCCAGAGCTGGAGCCTCTGTCATCAAGGAGTGTGTGCAGGacagcccctcccccttcccctccatgGAGGAACCCCCCCGGGTGGGGTCCCCTTCTTCGCACCCCAGTAGCAGTGCATCCAGCTCCCCCGGCCACCATCAGCACACCCCCGACCGCCTCATGATGAACACCTCTGATGGAGACCTGGGTGACCGAGAGGCTGGAATCAGTATGAAGAAAATACTGAAAGAGAAAGATGAGGCCCAGCTGATGCCCATGATGAAACCCGGGTTTGACAAATTGCCCCTGGCAGGACAATCCCTGCCGCATGGCTTTcccgcccccttcctcttcGCTGACGGGCTCTCCTCTGTGGAAACACTGCTTACCAACATCCAGggccTGTTGAAGGTGGCTGTGGATAATGCACGTGTACAGGAGAAGCAAGTCCAGCAGGAGAAAAAGGAGCTGAAGATGgagctctacagagagagagagatgagagagagtctggagaGACAGCTCACCTCCGAGCTACAAAGCAGAGCCACCATCCAGAAACGTCTGAAAAAGGAGAAGAAGGCGAAGAGGAAACTGCAGGAGGCGCTAGAGTTCGAGTCTAAACGGCGGGAACAGGTGGAGCAGGCGCTCAAACAGGCCACCACCCCTGAGAGCCTTTGCATGAGTCTCAACGAGGCAGTGATTCCAGAGATTGAGCCTGAACACAATGGAAGCCAGCAGGAGAACTCGGCTGTACAAGAAAACAGACCCTACATCAAACCCTCCATCTTGTACTGAGAGGAGTGCCACACCCTCCACCAGCATGGCAGGGTGAGGCATCACCCCCCCTAACAGACCCCCTGCCTgggaggagtggggggagggtggtcccATGCCATCTCCGGAAACTACCT

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	DACH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02437	Ski_Sno	SKI/SNO/DAC family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003380	Domain	SKI/SNO/DAC domain	Interproscan
IPR009061	Homologous_superfamily	Putative DNA-binding domain superfamily	Interproscan
IPR037000	Homologous_superfamily	Ski-like, DNA-binding domain superfamily	Interproscan
IPR052417	Family	Dachshund domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12577	DACHSHUND	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-