Gene detail

Detailed information of KAJ8402199.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8402199.1	VWFC DOMAIN-CONTAINING PROTEIN	AAFF_1.1_unplaced_65	1336268	1346024	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00370640

CAGCCACTTGGCGGAGCTCCTCTGCTCTATTAAACGCTTACTGTATATCGGTGGAAGAATTGTATGGCAAAATACTTTGTTTTAAAGGAAAATGCGGTTGATGCAGAGTCGATCTACCTCATATGTCCACATGATTACAATATATAAAAGCCTTGGATAACCTGAACAGACTTTAATATTTTTCTCTTAATACCCCGGTCGTCGAATGCATTGTCTTAGTAAAAGTATATTTGGATGCCTGACATAGttgtatgtaaaacatgAGGCGCGCATCTTCGGCGAAACTGCAGAATAGATTCATGATCTGAAGCGGAGTTTCACACTGGTCTGAAGTGTTTGCTGTCGCAGTTAGAATCCAAGAGTATATTAGTTATTGGCAACGAtttcattttagatttttatttatatcttaGATGAATTGTCTCCGACATGaagaacatttttatgtttttaatcctgCCTTTGTACATTGCTTGTGATTCCGAagcaataacaacaaaaaTCTCTGGCGTATTTTGTACTTTCAAAGAGAAGACGTACACTCCCGGGGACAGCTGGCATCCCTATCTCGAGCCGTTTGGATTCTTGTTCTGCGTGCGATGCGCGTGCACAGAGACTGGCCATGTGAAATGTAACACCATTAAGTGCCCGGTCCTTCGCTGTGAGAATCCAGTGACTGATGCCCAGCAGTGCTGCCCCCGCTGCACAGATCAGCAGAGAATCCCAGCAGGGCTGAGAGCCCCAGTGAAGTCCTGTCGGTATAATGGGACCGTGTACCAACCAGGGGAGACCTTTGCCAATCACGAGCTCTTCCCATCCAGGCAGGCAAACCAGTGTGTCATGTGCACCTGCTCTAATGGAAACATCTTCTGTGCCCTGAAGACTTGTGTGACACCTTCTTGCTCCTCACCAGTTTCTGTTCCAGACACATGCTGCCTCGTGTGCAAAGATGCTGCCATTAATGTAAATTCTGCATCAACAGAAGATGGAGGACAACAGTTAAACCGGGGAGTTAGGCACTCACAAGACCAGTGCTCTGGGGAGCAGCTGCGAGGCCGGGGGATGCGGGCCACTCCGTCCACAGTGAGGGGCTCCCTCAGGACGCTGAGCCTCCAGGGGCTGCGCTTCAAAGGGGCAGCAGGGACCACTGTGAAGATCCTCATGCAGAGGAAACACCAGAGAGcttGTGTGTACAGTGGCAGAACGTACTCCCATGGAGATGTGTGGCACCCGGTTTTGGGGAAAGTCCTGGACTGCATTCTGTGCACCTGCCAGGATGGTGTGCAGGAGTGCAAACGCCTCACATGTCCCAGTCAGTATCCATGTCCACACCCTGAGAAGACAGAGGGCAAGTGCTGCAAAGCATGTCCGGAACTGAAAGAAGAAACCAATGGGACACAGTGCCTTCTGGAACAAGACAGTAACAACCTTTTGGTTTACAAAGTTGAACCATCTTCAGAGTCTGACACAGAGGATGCTGTCAGAATAATCGCTATCGAAAAACAAGGAGTTGCTGAAGTTGAAGTACAAGTGTGGAAGACGGTTGAGGGAGTTTTGCACTTGATGGAGACAGGAGATCTTCAGAAGAAAGACCTAACAGACCACCCAGAGAACTATATCTTACTGACCACGCTTGACGAGGAGACTTGGAAGAAATTCAAGGAGGAAGAAAACAAGGGAAAGGAATTCCAGAAGAGCAGAACCTGTGAGGAGGGAATTAAAGAGGTGGTGAAGTTCCTAAATCCAGAGCAGCTAGACAGCTTGTGCACCTCTTAATTTTGCCTTATTGCTTCACCTCCCGACTGCtggaaaaagtttttttttttttaaaaggtctcAGAAATACCCAGCCAGTAAGGTGATACACTCCAGAACAGTTCTACAAAGTGGCTTGCTGCATTTTCATCTGTGGATTTCAGCGCCTGTATGCATTTCCCTTCGCAATGACTAGATGCTGATTCTGTGTAGAATGCTGACATTATTTGTGTTCTCTGTTTAACTGCAAGCTTTGAATTTGGCTGGGGCTTACATGACAAACAGGGAACCCCTGAAGCTACTATTAGGGCTTACTACAGATGACTGTCAGCATTCAGATGTTTTGTGGTAGTTTCTTAAACTGAATCTGATAAGGAATGATCTGAATATTCCACAAGAGAAGGAAAATAACATGGAGTGGAATGCGATACAGTCTGAAGCACATTTCATTCCTTATTTCTCACGCTTGAGAGCTGACATTTTTCTGGAGCAGTGATTTGTTTCATGGAAGACAAATAGATTAATAGGACTGAGTGCATCTGCTCAACCAATAAACCATGGtggttttaaacaaaaataaagtacaataaTAATCCTTATTTAGAATTCAGTGTATGCAATATTGTAAGCTACAGCtgtttttgtaaatatgtaaGACGAACCACCAGAGCAAATTAAACAGTCTCCTGGCCAGGACACTTTTATAAAGTTGATGTAGGCCATATTGCCATCACCTACTGTACTTTTTCTCCTGTAAGGAGTAGTATGCATTTCCAGTATGTATCATGGAATGAgaagcatatttaaatatatttgtaaatacaAAAATTAACACTGTCATTTGAGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093	VWC	von Willebrand factor type C domain	Domain	Interproscan
PF19548	CHRDL_1_2_C	Chordin-like protein 1/2 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR045716	Domain	Chordin-like protein 1/2, C-terminal	Interproscan
IPR045717	Family	Chordin-like protein 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46303	VWFC DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030514	Biological Process	negative regulation of BMP signaling pathway	Interproscan
GO:0036122	Molecular Function	BMP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-