Gene detail

Detailed information of KAJ8401566.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8401566.1	CYTOKINE RECEPTOR	AAFF_1.1_unplaced_69	1237909	1257633	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00378830

Transcript

AAFF_T00378830

ATGCCCTGGGTTGTGCATGTGCTGCTCCTCGTAACGGTTTCAGGATATGAGTGTGGATGGTGCCTTGAACCAGGCAAGACGCCAAGCATCGTCGAATTGCATCCCAATAACCGCGAGCAGAGTTTGGTGGTCAAGTGGAGAGCAAACCGCGATGGCTTCGGGGAAAGCAATGCGACTTTTGAGATCCATGTCGGGCGCACAGAAAACCTCGATATTGTCCAGAGAaCTAATGTAACTGTGGCATTTCCAAGTGATGATATTCTGTTGACTTGGAAATGGGTCTCGGAACTACCTTTGCAATGCATCGACCACTCGGTAAGAATTAGATGCCTTCTCAACGACACATTTGCAAGTGACTGGACTCCTTGGAAAATGAATTTGGCGAGCAAACAGGAAGTTGCTGGCCGGCCATGGAAAAGGATGTTTCCATACCAGCAAGTTTTAAAGGAAGGATCATCAGCCTATTTCTGCTGCATACCACGAAGAGGGACAAATATCACCAAGATGATTTTCAACTCAACATATCCCTCCATGATTGACATTGGTGACAGAGTCAAGGCATTTGTAGTGGAGAATCTCATTGCCACCCCTCGGTATGGTGTCCATTTTAGCTGTGTGGACTCTCAAAACATGAAGAAACATTGCTTCAATTATGTAACCTTTCCCCCACAGAGACCCCAAAACCTCAGCTGTGAGACTCGGGACCTCAGGACCCTGAACTGCTCATGGAAACCTGGCAGGCTGCCTAACTTGCGCAAGTTATATAAACGCAACTACACCCTGTTCATACAGAACTCAAACAATTCAATCAGCTGTAAGGATTCCTCATCCTCATGCAGCTTCAAGGCCATTCCTGGGCAACAGGTGTACAACATCACAGTGAAGGTAGCAAACAACCTGGGGGAGGTGAGGGAGAGCATCACCTTCAACATCACTGACAGAGTTTTTCCTGTGCCGGTGCAGCTGGAAGTGAACCCTGGAGTGAGGAATGCCAATGTGTCATGGACACTAGCAGGAAACCTGTCTGGGTTTGGACTCCTCTGTCAGATCAGGACTGACCCATTCAGTGCTGCCGTAGATGTAGAGCTGCTGGGGCGGTTGGATGGGCGCTATGAGAGCAGGGTGGAGGGGCTCCGTCCTTGCAAACGTTACCCCGTTACAGTGCGCTGTGCCATCTCAGGGACGGTTTGGAGGTGGGGACTGTGGGCAGACTCCCAGTTCTACACCCGTCCTTGTGTTGAACTAGACACCTGGGGGCAGGTCAGGCAACACACTCAGGGTCGCAAAGTTACTGTGATGTGGAGGATGCTTTCCCCTCAGCACTGCAATGGCTTGGACCTGAACGTCAGCATCCAGGACTACTGGATTCAATGGGAGCAGCTGACCCAACATGGGGCAGTGTCTGTCAGTGGTGTTGAGACACAAACCGAGCTCTCCATTGGTTCCAAGGCATCCAACATCACCGTAACAGCTGTCAGTCAATGTGGCTTCTCCCTGCCATCCACCATCACCATCCTCCCAGCAGGAAACGGAGTGCACCTCCTAAAGGCCAGGAGGGTGAATGGAAGTCCTACAGAGGGATTCCAGCTGTCATGGGCTGCCTCTACCCTCATCACGTGTGGGTACACCGTGGAGTGGTGCAGGCTTGGGAGCGTGCCTGCCTGCAGCCTGCAGTGGAAGAAGGTGCCAGTGGAATTCACCACTCTCCTTCTCCCAGCCTGCAGTGGAAGAGTTAGtccactggtggtgcttcatggcccagGGGACTTCAGAGCAGGGTGCAGATACACTTTCAACATATTTGGCTGCGGAACAGATGGACACCAGCTgctggagaaacagacaggcTACATAGAGGAGCAGAAGCCCACAAAGTCACCCCGGTTGCTGGACTCTATCAGATCCATGCACTCTTCCATCATACTGGAGTGGAGTTTCCATGAAGATGATCTGACTCACACTGGCTTCATTACGGGGTACCTTGTTATCATTGAGGAGATGACCCCCAGCACTATCCCCCACAGCTACGAGCAGAGTTCCTACAATCTCTCTGTGGATGACCCACACAAGAAGACTCTCACTATTGATGCTTTACAGGAAGACAGGGAGTACACCTTCCATTTGGGGGCATGCacagtggtgggggtggggcctcTTGCCGACTGCACTGTGAGGACCCCCCGAAACTACTCTAAGTTTCTGGTGAAGGTCCTGATACCCACCCTGCTGTTATTTGGGCTGGGATTCCTCCTGTGGCTCCACCGCAAAATGATTATGGGTCCTGTTCTGGAGGTTTTGAAAAATCCTGTGGCGCTGAGGATCAAAGCACTGGAACTGGACAGCTCTCTGTATGAGGCCAGTGAGAGGATTCGTGCCCTGAAGGTTGAGGAGTGCATCTGCTGTGAGCTTGAGCTGCTGGAGGTGAAACTTGCACCGGACACAAAGCTCCAGATGGATCCCAAAGGCTGTGGCTGCCCCTGTGGGGACGATGATGTGACACAGGGTCTTTAACACCCTCAGGGCCCTACCGGTGTAATCTGAAGTGCATTCTTTtaggatttttttccccatttttctcccaatttagtggccaattataccctttatactatttatttagattttccctccccacatgaaattgccacccatctctacgaggcaagataacTCTTGATaaccgagggcagcgaactccgtttAGAACGGAGCTAGTTCGtttcggctcaccctccccctccccctggggcgaacagccaaatgccacccccgatcgggctccccgccagggctggtctggcagtcaggtttcgaacaacgaccgtgataggcagctcacactcgtaaacgagtgcattagaccactacgctatcgaaGGCCCCACCTGAGGTGTATTCTATAGGTGATTGTGAGGATGCCTTAGACAATCAATCACCCAGGGTTTGAGTAGTTCTCCCTGAAATTTGGCTTCTCAGCAATGCTCCCCTACACAGACCTGTCTTAAGAGAGGTACCCTGAGGTTTTCCAAGAGGGACTGACTATGCCAAGTGatactatactccaaaaaatattttaaaaaataaagtattcttTGTGTGACTGAAATGGCATCTTTTGGGAAGATTAATGAATTTAATGGATCCGTGGAAGACTGGACGCACTATACAGAAAAGTTAGAGCAGTATTTTATTGTCAATGACATTGATGATGAAGCCAAGAAGCAGGCGATATTAGGATCCGGATCAGGATCCGGGAATTGGTGTCCTTCATCCTGTGGAGTCACTGGAGGGGTGCGTGATAGGAGGATAAAGTGGCTGGAGCCCTATGCAAACCGAACGGTAAGGTCAGAAATTAGTGTAAACCGAACAGAGTAGAGAAAGCCCATTTTTCCTTGGATGCTGGAGAggagggaatctgccagtaacccttggttaaatccaatGTCGAATAAAAATGAGCAGTGCCTAACCAATCCAGTAGCTCCTCAACCTGGGGCATTGGATACGTGTCAAATTTCAAGACTGTGTTTACCTTTCTATAGTCTACGCAAAATTGAACAGACCCATTGGGCTTGGGGACAAGAACGATGGGACTGCACCAACTCCTCAATCACTCCTATGTCCAGCATTTTCcccaattcttcctgaaccaacttttcatttttttcctcttctgttCAGGTAACCGATATGGCCAGCTCCGAATTACAGTGGTTACGTCTACATTACGTATAGTATGTCTCGCAGTTCCAAGACatactgtatttcatttttactgGGGCTAGGACTTTCCTCCCAAGTTTCCCTTAATAAGTCCAAAATACCCCTGGGTCAGCACCCATACAATAGTTCAAAGGGGTGAAACCCTGTGGAAGCTTGGGGTACCTCCTTGATGGCAAATAACAGGGGTCAATTAATTTAACCTAATGGTGGTTGTCAGCCAGCTGGACGGCTGCAGCCAGGGTTGGTGACTGGTGGCAACAGAGCCAATTCGAGACTCCTTTCGGGAGCCCCAGAATGAACTGCTCCAGCGCCACCAGCTGCATGATGTCATCTGGATTATGGACCTCTGGCTGCAGCCAATGCCGGCAGGAGTCAAGAAGCTGCTGCGCATAGGCGAAGGGACGACCGACTTTGGCAAACTGGAGCTCCCGGAGGCACCACCACTGTTCCTCTGGCTTCAACCCCATTCGTTCCGAGATGGTGGTCCAGAGGTTCGGATAGTCAGCCCTGGCACTGGTCGGCACACTGTGGGCCGCTACCTGGCTCACCTGAGAGAAGCGGTATGAGCTGTAGCGCCCACTCGGTCAAAGGCCAGCCGTAGCTGTCCTCTCGAAAAGATCCATGAATACCCCTGGGTCGTCGTCCAGTCCCATCTTCTTCATCCTGATGTCAGACCAGACCGGTGTTGGAGTGGGGGAAGCCTCCTTCAGCAGCTCCATGAGGACGGCTCTGTTTAGCATTTCTGTAAAACCTGTGCTTCAGCCTAACACAAAACCTTATTTAATTGGTAGTAGTCAGCACAGAAATTCCTAAACCTTCTATATGACTTCGAACCAACTGTGGCCTTCGATACTGATGGGACAATGAGGTATCATGATACTAAAAATGGATGGAAATACCATTAaatgtcaatcactgacttgatTGACTGCTTTTCACAGCAAAACTCAATGATTGGTAGTATATGCCAGCTCCACCCATGTTTAGTGTTGTATTTCATTGTCCAATCGCTAGCCTTCAGCACcataatgcatttatacagatggataatAATAAAAGCTAGAAGAGTTGTCAGTTGAGGTAGAGTTTTTGTGTGGGGTGAAAGAGATGtctctttttatgttttttcattgaCATTGTACACTACTCACAAGGGACATTTTGTGTAGAGGTGGCTAATCCTGGTTCAACAGGTCCAACTCCTAGGAAACTTTCTTTCACCAGATTAATTACATGCAATGATTGAACTAACTTAGCCAACCGATGGCACAACCAGTAATGGCTCTTGTTCtaagtgcaagttgcccactgcagcgattggctgttcacccccagagaaaggggggagggaagcggaCATGAGTTCGctccgtgtctctgtgtgttggaGTAACAGTCAGCGGCTTCAGCGGGGGGTATAatcggccaccaaattgggagaaagaccgGGAAAATAACCGAAACTAAATAATTTGTAGCCATGAAGCAACAAAGACTATATGGCCCtattgcaaacacacatacccaATATAGTACAAGAGCGATGGACTAGTGGTAATCACTAATACAGtacaaaaaggaaataactAGTGACAAAATCCATTCAAATTgcaatgggaaaataaatttataaaatcTGGAGACCAGCAGATCGAAAGCTTGTAGCCTGTGACATTATGTGTGTTCAGTCAATCAATACAGTAGAATTATATCACATGAGAAGTTACAATAAATTTGAGTAGTAAATGTTGGAAGCTTCAATTTAAAAGGATGGGGTGAAAAAGCAATGTGTCCCATGCTCCGCGATATCAGTgctccaatgttttttttcaatttcacgATTGGGCAATTCACATCAAGCATGAAGCAAACTGCTGCAAAGGCTGTATACTGATGTATAAGTTACATAGCCTAAGTAAGTTATAAGGAACCCCATACTAATTATATGCTTATTCTCTCTTGATCATGTCATACATTTTGTTGCAATGAGGCCAAAACCTTACTCagggttgtttttaaaaactttttcatATTGAGtgtaacatgtttcataattgttttgatgttccatgctcttttaaatattatttcttAATCCCCGTTACAGCAATTCATTaagaatgtaaatgtgac

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09240	IL6Ra-bind	Interleukin-6 receptor alpha chain, binding	Domain	Interproscan
PF17971	LIFR_D2	Leukemia inhibitory factor receptor D2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015321	Domain	Type I cytokine receptor, cytokine-binding domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR040817	Domain	Leukemia inhibitory factor receptor, D2 domain	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-