Gene detail

Detailed information of KAJ8400605.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8400605.1	DNA2/NAM7 HELICASE FAMILY MEMBER	AAFF_1.1_unplaced_75	1822984	1844585	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00393740

ATGAAGATTGCTCTGCCTGGGGACCTTTTTGCTTCAGTCCCAGTATTGTCTGTGCTGACCACTCACACCCCAGAGGGCTTTGTCCTTAAGAGAGCTGTCCGGTCAGCTCTCATAGCAGCTTCTTCGTCTGTGGACAACCAGCATCAGAAAGTGTACGAGGCAGTCATCCTTCTAAACACCAGCAGTGAGAAGACAATGTACCTGCAGCTCTCCAAAAGATGCTGCACCGAACTGGGCCTCCAGAACGACACGACCAGCGAGATGGAGGTCCAGTTTCAGCTGAACCGCCTCCAGTTCTGCGAGATGCACAAGGCCATTGACCTTCTTTCAGACGTAGAGAGGGTTTTGCCAGATCTGAAGAAGAGCTGTGTTCCGGTGCACACAGGAGAATACCCCAGGCTCAATGCTAAGCAGCAATCAGCCATCGCTTTCATCGTTGGGGATTCAGATGGCTTGAAGCCTGTGGCACCACTCCTGATTTATGGACCGTTTGGAACAGGGAAGACTTTCACCCTGGCCACAGCAGCCAAGGAGCTGTACTGCCATCGGGATGGCCAAGCGTTCACGTTTCCTGGAAGGTCTGACTTAGACTCTCACCGGGTTATCATAACGACAGGGGCCATGGCGGGGGACCTCCGCAACCTGAAGCTCCCAGAGGGTTACTTCACCCACATTCTGATCGACGAGGCCTCCCAGATGCTGGAGTGCGAGGCTCTGATGCCCCTTGGTCTGGCAGGTCGAGGAACGCGAGTGGTTTTAGCTGGAGATCACATGCAGATGGGGCCGAAGCTCTTCTCAGTTGACGAGGACCAGCGCTCCAACCACACCCTGCTCAACCGCCTCTTCCACCACTACCAGGGGCAAAAGAATCCAGTGGCCCTGAAAAGCAGAATCATCTTCAATGAAAACTACCGCTCCACCAAGGAAATAGTGGATTTTGTGTCCACTCACTTCTACGGCAAGAGCGATGCCATCAAGGCCAGTGGAAATGTGCCCCCTCACCCTCGGTATCATCCTCTGAGGTTCCACCACGTTAGTGGAAAATGCCACTTGGACACGTCAACTATGTCCTGGTACAATCTTGAGGAGGTTGCTTGTGTGGTAGATGTAGTGCAAAAACTATATGAAGAATGGCCAGCTCAGTGGGGGAATCGGGAACCGAGGATGATTTGCGTTCTGTCTGAAGGAAGTCAGGTAGTTCTTATCAGAAAAGAACTGCGGAAAAGACGTCTTGGCGGAGTAACTGTGGAGAATGCAGAGAATGTTCAAGgcAAGCAGTTCCGGGGAGTAGTGATATCAACGGTTCATACTCGAGAAAGCTTGCACTCCCCTGACACGATTTGTCTAGAGTTCTTCAATGATGCACGGGTGATGAACACAGTCATGACCAGAGCACAGTCCCAGGTCATTGTGGTGGGAAATGCTGCAGCCCTCTGCTCCATTGGGAAATGCTCAAGGATTTGGAAGAGCTACATAGAGCACTGCATCAGGAAGAGTAGCGCTGAACCACAGCACCTCACAGTGGACTGCATCGAGCAAGAGGTGGAGGAAATCTCAAGATTTCTAAGGGTTAAGTGCAAGGATGTCAGTGATGTTGATTCAGCCACATCAGGGGCAGGCGCCAAAGTGGATGAGATACTCCAGCAGTTGATTGAAGACTACAGTGCTATGAATGAAGAAGCATTTCAGGCAGACCATTCACAGGGTGCTGACAGACCAAGCTTCAGTGAAGACAAGAGAGTGTATGATTCTAATTCTGAGAAAGATTCACTGTTGGAAATGGTGAGAATGCGACCAGATATGTACAAACACGGCAAATTAGTGATGGAAAGATTTGACAGAGGCTACGTCATGCCATTTGACGACCCCAACGCACACATCGGAATCAATGGACGGAAGAATCTGGACATGTCCTTCAATGGTGACGAGGTTGTAGTGGAAAAATCCACGGACGAGAAAGGTCTGGCCATTTGGAAGGTTTTAGTCATCACCAAAATTGCTGAATCTTCTCGCTCATTTGTGTGCACCCTCGAGGAGGATGATAACCAAAAACAGGAGGGTGACAGTAAATTTGTCAGCAAGGTCATGGTCCCCCTTAACAAGAACATCACCAAAATTCGAACTCTAGTCAGCAAAAAAAATCGCAATACCATCCCAATATATAAGCTTGATGACGGAAACTGGAAGATCGAAAGGGTCTGCAGAAAGGCCAGGCTCCAGGGTGACTGGCTCTACGCACAGCCTGATGAAAATAGGTCCGTTGGGAACAGAAAATCCCATCAGATGATCGAAGAGCTGATGATAATGTTCAATAATTCTGTATCTGAGTTTTTGATCGGCGAAAAGGAAACGGATGATTGCACTCCGCTGAGGTGCCAGGCAAGCCCTGACCCTGAGCTTGTGGGAGCTCTGAAGGAGAAGTATAAAGACATTATATCAATGTCTACACACTTGACATACCACATTGGCAACGTCGAGCAGCCTTCTTGTGGCGAGAGCTTCCGGGTGTTAACTTCACTTTGGAAGGAGCTTCAGTCTGCCGCTAAGAGGGGGGACGTTGCCAAAGTAGCAGACCTGATCGCCACCGATGACATCCACCCACAGCTGCTCCCTGCCACGTCAGAGTTCAGGAGGCTGCTCAGAAAGGCTTATGTCATTCGCGCCAACTCGGCGCACAAGGCAAAGGTCGGCCACTACTCTTTGCAGCTTGATTCTTACACAAAGGCATCATCGCCCATCCGCAGCTATCTGGACGTGATTCTTCAGAGACTTCTCCATGCGGCGCTCTGTCATACTCCGGCCCTGTACTCTCCACAAGAGATTGACATGTTGTGCGATCAGGTTGAGGAAACCCGCAAGAAGGCAGACGAGTACCAAAGAAAGGCCGAAACCTTCTCCTTTGCCATAAACCTGAAAAAGCAAAGCGCTCCAAAGCTGGCATTTGTCACTGTGGTCGATCCAGAAGGAGACAATTTCAAGCTATCGTTTCCCTTTGACAAAGGTACTTTGCCTGGCTTCATACCTGTCCTGTACAGAGATTTGCAACTTGAGGATCAGCCGCTGTTTGACAAAGACAGCGAGCACATGAAGCTGGCATGGAGAAGAAGAGTGTACTCCATCAACACCACTAAGGCCTACGTGGAGCTCAAAAGGCTGCACCGTAACAACCCATGCACCGACGTCCCACACGACGCCTGGCGACACATCGTCGAAGCTTTGAAGACGGAAAAATGGGAAACGGCAATATCCATTATATTGaggacaaaaacagaaaaggcaGGAGAAGGGGGAAAAGGGCAAAGCAAAAGTACAGCTGccacaaaaaagaaagacaacGCAGGCGGCTTGACACAAATGGAGATAGAGCATTATGTTGACCTTGATCTCGAGCTGAAGCCCGGAGACACCGTTCAGGTCCAGATgatgacagaaatgcagcggGGGCTCCTGATGCCCGTCGTTCAGTTGCTCAACATCAATGAAAAGTTTGAGGTGTGTCTGAACCACGCGCGCAGTCCCATCGACTGTTTCGCCAAATATGCTCAGCATAAATCAAAGTCGTCCTACAAGACTGTTGAGAACTATGCGAGGATCTGGAAACCACTTTGCGAAATGGAGTCTGCTTCCACCGCTGTGGATGAAAACGAGAGCATAATCATCGAGGACTTGGAGCTGACGTGGACCgaagaacagaaaggcagtTTTCTTCTTTCGCATGACTTTATTAAAGATTGGGCCATTGAATGCAGCCTTGCCAACTGCTACTTGTGCATTCGGAAGAGGGACTTGAAACAAACCGCTGCTGTTGACCGGTCTGAGGAGCAGGTGGATCCCAGGAATTTTACTTGGGTAGCCCATGGGGTCACTACTGGTTGTACAGATACAAAGAAGAATTCCAAAAATCCTAAATCCAAACAAGTGTATTTCTACATCAACCACTTGCCTATGGATGCCACTCCAGATTGCGTGTACCAGAAAAGCACAAAGTTTACTGTTGAGCTCATCCCAAAACCTCTTCCTGATGTGCGCAAAGAAAGTGCTGTTAACAACCTCAACCACACAAATGATCTTGTTCAGAGGATTGTGCTCGGACATCCCATTCCCAGAGGAGCTTCCGAATCTCCGATCCCAAGGTGGAAAATGATGAAACACAAGCCACCAAAAGGGCTCCCACCGCTGAACAAAAGCCAGTACTCTGCGATAGACAGTGCCCTGACCAAAACTTTTACTGTCATCCAAGGGCCACCTGGGACTGGAAAAACTGTGGTGGGAGCATACATTGTGTACTGGTTCTTTGTGCTGAACTCTGAGATCCCCAGGCAGAATCAGAACCCCGCAGACAGCAACAAGAAGGAGGTTATTCTCTACTGTGGCCCTTCCAACAAATCAGTTGATGTTGTCGCAGAGTACCTGTTGAGGTTTGGGGACAGGCTAAAGCCACTCAGGGTGTACAGCCGGCAGATGGAGATGCTGGAGTATCCCTATCCAGGAAGCATCCTTCAGCTTTCCCACAAGTCAATGCGCCAAGAACAATCCAAGGCAGACCTCAGGCCTATCACTATGCACCATCGTATGCGGGAACCAGAGAATCCACACTGGAAGGAGATCAGAAAATTTGATGAACGAATCAGGCTGGGGGAGAAGCTGACAGATATAGACGTCGAAGCATACAAAAATCTGCTGAACGAAGCACGGCTGCACGAGCTGAAGAAGCACGATGTCATATTGTGCACCTGCACAGCCGCCTCCACCCCGAACCTCACCAAGACCATCAGCGCACGCCAGATTCTCATCGATGAGTGCGCCATGGCAACCGAGCCCCAGGCTCTGGTCCCCCTGGTCAGCTTTAAACCGGAGAAGatCGTGTTGATTGGGGATCACAAACAGCTGCGGCCCATAGTCAGGAATGCACTTGTTCGACAATTGGGCATGTCAAAGTCACTGTTTGAGCGCTACATGGGCAAGGCAGTGATGCTGGACATACAGTACAGAATGCATGAAGATATCTGCAAATTTCCATCTGAGGAGTCTTACGAGGGAAAGTTGAAAACTGGCGTGGAGCGGAAAAACAGTTTCCTCATGATCTCTGATAAAAACGTCCAGACTGCTTTTGGACATGTGAGTGGAGAGGAGGTCAGTCTGGTGGTGATGACGGAGAAGGGAAACGAGAATTCGAAAGCAAACATAAAGGAGGGTGAAATTGCTGTTGACATTGCTATATCACTTGTAAATGATGCCAGAATCCGTCCAGGGCACATTGCGATTCTGTCCCCCTATAACGCCCAGGTCTCTGAGATCAGAAATCTTCTGAAGAAAAAGCACGTGCAGGGAATCACAGTCAGCACCATCACAAAGAGTCAAGGAAGTGAATGGCGCTACGTAATCCTGTCCACCGTGCGCTCCTGTCCCAGCGATGAGATCGAGACGGATCCCGGCAGGGCGTGGCTTTCCAAACACGTGGGCTTTGTTGGCGATCCCAACCAGATCAACGTGGGGATCACCAGAGCGCAAGAGGGCCTGTGTATTATCGgAAACCGACAGTTGCTGAGTCGGAGTAAAGCGTGGAGAAACCTGCTCGAGCATTACACGTCGAACGGCTGCGTCACCATGGCCACCGACATTACAGTGCGCAAAGTGGCCTAG

Transcript

AAFF_T00393740

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00773	RNB	RNB domain	Domain	Interproscan
PF13086	AAA_11	AAA domain	Domain	Interproscan
PF13087	AAA_12	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR041679	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR047187	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR050534	Family	Coronaviruses polyprotein 1ab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43788	DNA2/NAM7 HELICASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0043139	Molecular Function	5'-3' DNA helicase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-