Gene detail

Detailed information of KAJ8400217.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8400217.1	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	AAFF_1.1_unplaced_78	2353858	2390317	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00399110

ATGCCAATGGTCTCAGTAAGTGACAGAGAAGTGTTGACCATTGGCAATGACTCACTGAGGGCATTGGCAAGGGTGCCGCTGGCAGGTACCTACAAGAGTGTTGTGCTGCCCTATAAGGACAATGCCCTGGCAGCCTTGGCTTTTGTGGAGGAAGGGGAGAGTGAGAGCAGTGAGGGATCCAGCTCGGCCTCCTGCCCCAGCCCAGTGTCTCAGGATGCGGGGGCAAGTGTCAGCCCTGAGCTGGGGGAGGATGGGAGCCTCTTGCGCCTCTATCTCACCTCCACGGTGGGCAGCGAGGAGAGGCCTAGTGGGGGCCTGACACCCAGGCTGCCGGACTTCAGATCCAGGCTCCCCAGTAACTTCTCCCCAACCCTTGAGGAAATAGAGGAGTTCCTACGGGAAAAGATGGAGCATGTCAAAGATGGTCTTTTAGACCCTGAAAACCAGCTGGAAGccagccccccaaaaaatcccTCCACCCCCAGCAGACTTGATTCACCGGGGGCCAGTTCTGTCCCAGAAGCCCCCACGTCACAGAGCCCGGGCCCATCTGCTACCTCAGCATCTCCAGTCCTGGTAGGTGCTCCCGTGGTGCTTCAGCTGCAACCCCTGCAACTcgcacccccacccacccagccCGCCCCTCAGACAGGCGGTGGCAGCGGGTTCCAGGTGGCGCACCTGGTGCTTGGTGTTCACGGCAGCCAGAATTTTACCTTGCTGCCGCAGATGTCACCCGCTACACTCGTGCCTGTGATGGGCGAGGCAGGGGGCCAGGaccaaaaatatgtgaaaatcGCGCCCCTGCCCATCACGGTGAGGACACTGGGGGTTCCCGGTGGCAGTCTTGTCAAAGCCATCCCGCCACGGGCTGCCAAAGCCCCACCGGAGATGCAGCGCGTCCACAAGTGCTCCCACCCGGGCTGCGAGAAGATGTACACCAAAAGCAGCCACCTTAAGGCCCACTTCCGCCGGCACACCGGGGAGAAGCCATACACATGTGCCTGGCCAGATTGTGGTTGGAGGTTCTCCCGCTCCGATGAGCTCTCTCGCCACCGTCGTTCCCACTCGGGAGTCAAACCCTACAAGTGCCCGATGTGCGACAAGAAGTTTGCTCGGAGTGACCACCTGTCTAAACACACCAAGCAAGGATCTTGGCTAGTTTGGTGTGtGGGCATGGACAGCTCGATGACCCTGTGGCAGTTCTTGCTGCAGCTCCTCCTGGACACCAACAATGACCAGCTGATCTGCTGGACCAGCGACGATGGAGAGTTCAAGCTGCTGCAGGCTGAGGAGGTGGCCAAGCTGTGGGGAGCCCGCAAGAACAAGCCAAGCATGAACTACGACAAGCTCAGCCGCGCCCTGCGCTACTATTATGACAAGAACATCATCAAGAAGGTTAATGGCCAGAAGTTTGTGTACCGCTTTGTGTCCTACCCAGACATCCTTAGTGGAGATGCAGTGACAAGGGTGGAGGGAGCAGGGGAGGGGGTTGCAGAGGGGGCCCTGCCCTTCTCTGAGAGGGGGGTAACTCTGAAGGACAAGGAGACTCAAGCTGGGGGTGAGAAGTCCAACACACTTGCTATTGCCCAGGGCTCCAGCAAGCCCTCGAACCGCAATGACTACATCCACTCCGGTCTCTACACCTCCTTCACCCTCACTTCCCTCCAGGCCGGCACCCAGCTCTTCAAGTCCATTAAGGTGGAAAACCCAGGTGAGAAGACGGCGGAAAGGAAGGCCGATCAAAGCCCGCTGGCGTCTGTAATCAAATTTGGGACTGCTTCCCTGAAGAAGATACCACCAGTCACTCCAGAATCTGTTCCTCAAGAACCCTCGGGGGCGAAGCCACACCCACAACGGTTACACCCGTTTCAAGCACCGCCTCACATGGATGATGTCATGTTAAAGCAGTCTCCCCTTCCTCTAGTGTCCTGTGTGCTTGAAGAGGACCCGTCCACTGAGGCACCGTTACCTGGCCTCCCTCTGGCTGGGCTCTCCCCCCAtgtcccctccccttccccctcccactccccgtCCCCCAGTACAGTCCATGACTCCACCCAAGAGCTGGTGATTGACAGCGACATGGAGTCCATCTCCTCCCAGCCCTCTGAGATGCAGCTGCAGgcgCAGGCAGCCGCTACATCTCGGGACGTGAGCACATCGCACTACGAGGTGGTCCGCTCTCCACCCCCCAGCACTGGAGGCGGTCCCCAGAACGGGAAGTCAAAGAAGCCCAAGGGCCTGGAGCTGACCCCCACCTTGGTGGTGACCAGCTCAGACCTGAGCCCCAGGAACCTGTGTAGCCCCTCCCTGCCCACGGCCTCTCTCACCCCAGCCTTCCTGCAGacACCTACACTAATACTCACACCCAGCCCTCTCCTGTCCAACATCCACTTCTGGAGCACTCTCAGTCCAGTGGCCCCCCTGAGTCCCGCCCGGAGACACGGCACACACACCCTGTTCCAGTTCCCCTCAGTCCTCAACACTCAGTTCCAGTTGCCAATGCACAGCCTGGATGGCTCCAACACACCCGGACCTCTCTCCCCGGATCCTCAGAAGACGTAG

Transcript

AAFF_T00399110

ACGGTATCTCGCTTGTGCTTCTGATGACACCAATTATTTAGTGAATAAAATAATGAGTAGCACGCGAGTGAAAGAGAAAACAGAGCAGGTGACGTCTTCATAAGCCTTAACGTGTGCCTTTTCGAAGCAAACCAATAGGACCTCACACAATAGGTCGAGCCTCCCCTTCGATAACCAATCATAACGGTGCAATTGGATCCGAGCCCCTGGCTACAATGCATTGCAGTCATGTGATGGGTCCTGCATCGTGATAGAATGCCAACATGGAACTGTGGAAAGGACGACGTTTCGTTTTTAATAACAATAACTGAAAAGAGAGCTTCGAGGAATATGGTTAAGGGAAATAACCTCTTTTTAAGGTAAAGTGCTGTGTTGTCATTtctgtttccattttttattttttattttttttggtgggaCTTTGCCACCTGAAAATATCTGTATTAGGCCTGACCCAGCATAGTGGACTCCTAACTGGATGCCAATGGTCTCAGTAAGTGACAGAGAAGTGTTGACCATTGGCAATGACTCACTGAGGGCATTGGCAAGGGTGCCGCTGGCAGGTACCTACAAGAGTGTTGTGCTGCCCTATAAGGACAATGCCCTGGCAGCCTTGGCTTTTGTGGAGGAAGGGGAGAGTGAGAGCAGTGAGGGATCCAGCTCGGCCTCCTGCCCCAGCCCAGTGTCTCAGGATGCGGGGGCAAGTGTCAGCCCTGAGCTGGGGGAGGATGGGAGCCTCTTGCGCCTCTATCTCACCTCCACGGTGGGCAGCGAGGAGAGGCCTAGTGGGGGCCTGACACCCAGGCTGCCGGACTTCAGATCCAGGCTCCCCAGTAACTTCTCCCCAACCCTTGAGGAAATAGAGGAGTTCCTACGGGAAAAGATGGAGCATGTCAAAGATGGTCTTTTAGACCCTGAAAACCAGCTGGAAGccagccccccaaaaaatcccTCCACCCCCAGCAGACTTGATTCACCGGGGGCCAGTTCTGTCCCAGAAGCCCCCACGTCACAGAGCCCGGGCCCATCTGCTACCTCAGCATCTCCAGTCCTGGTAGGTGCTCCCGTGGTGCTTCAGCTGCAACCCCTGCAACTcgcacccccacccacccagccCGCCCCTCAGACAGGCGGTGGCAGCGGGTTCCAGGTGGCGCACCTGGTGCTTGGTGTTCACGGCAGCCAGAATTTTACCTTGCTGCCGCAGATGTCACCCGCTACACTCGTGCCTGTGATGGGCGAGGCAGGGGGCCAGGaccaaaaatatgtgaaaatcGCGCCCCTGCCCATCACGGTGAGGACACTGGGGGTTCCCGGTGGCAGTCTTGTCAAAGCCATCCCGCCACGGGCTGCCAAAGCCCCACCGGAGATGCAGCGCGTCCACAAGTGCTCCCACCCGGGCTGCGAGAAGATGTACACCAAAAGCAGCCACCTTAAGGCCCACTTCCGCCGGCACACCGGGGAGAAGCCATACACATGTGCCTGGCCAGATTGTGGTTGGAGGTTCTCCCGCTCCGATGAGCTCTCTCGCCACCGTCGTTCCCACTCGGGAGTCAAACCCTACAAGTGCCCGATGTGCGACAAGAAGTTTGCTCGGAGTGACCACCTGTCTAAACACACCAAGCAAGGATCTTGGCTAGTTTGGTGTGtGGGCATGGACAGCTCGATGACCCTGTGGCAGTTCTTGCTGCAGCTCCTCCTGGACACCAACAATGACCAGCTGATCTGCTGGACCAGCGACGATGGAGAGTTCAAGCTGCTGCAGGCTGAGGAGGTGGCCAAGCTGTGGGGAGCCCGCAAGAACAAGCCAAGCATGAACTACGACAAGCTCAGCCGCGCCCTGCGCTACTATTATGACAAGAACATCATCAAGAAGGTTAATGGCCAGAAGTTTGTGTACCGCTTTGTGTCCTACCCAGACATCCTTAGTGGAGATGCAGTGACAAGGGTGGAGGGAGCAGGGGAGGGGGTTGCAGAGGGGGCCCTGCCCTTCTCTGAGAGGGGGGTAACTCTGAAGGACAAGGAGACTCAAGCTGGGGGTGAGAAGTCCAACACACTTGCTATTGCCCAGGGCTCCAGCAAGCCCTCGAACCGCAATGACTACATCCACTCCGGTCTCTACACCTCCTTCACCCTCACTTCCCTCCAGGCCGGCACCCAGCTCTTCAAGTCCATTAAGGTGGAAAACCCAGGTGAGAAGACGGCGGAAAGGAAGGCCGATCAAAGCCCGCTGGCGTCTGTAATCAAATTTGGGACTGCTTCCCTGAAGAAGATACCACCAGTCACTCCAGAATCTGTTCCTCAAGAACCCTCGGGGGCGAAGCCACACCCACAACGGTTACACCCGTTTCAAGCACCGCCTCACATGGATGATGTCATGTTAAAGCAGTCTCCCCTTCCTCTAGTGTCCTGTGTGCTTGAAGAGGACCCGTCCACTGAGGCACCGTTACCTGGCCTCCCTCTGGCTGGGCTCTCCCCCCAtgtcccctccccttccccctcccactccccgtCCCCCAGTACAGTCCATGACTCCACCCAAGAGCTGGTGATTGACAGCGACATGGAGTCCATCTCCTCCCAGCCCTCTGAGATGCAGCTGCAGgcgCAGGCAGCCGCTACATCTCGGGACGTGAGCACATCGCACTACGAGGTGGTCCGCTCTCCACCCCCCAGCACTGGAGGCGGTCCCCAGAACGGGAAGTCAAAGAAGCCCAAGGGCCTGGAGCTGACCCCCACCTTGGTGGTGACCAGCTCAGACCTGAGCCCCAGGAACCTGTGTAGCCCCTCCCTGCCCACGGCCTCTCTCACCCCAGCCTTCCTGCAGacACCTACACTAATACTCACACCCAGCCCTCTCCTGTCCAACATCCACTTCTGGAGCACTCTCAGTCCAGTGGCCCCCCTGAGTCCCGCCCGGAGACACGGCACACACACCCTGTTCCAGTTCCCCTCAGTCCTCAACACTCAGTTCCAGTTGCCAATGCACAGCCTGGATGGCTCCAACACACCCGGACCTCTCTCCCCGGATCCTCAGAAGACGTAGGGCAGGAGCCAAGATACCGGGCGTGGGCCCCAGTGCTAACTGGCACCCAGTGCCATGTCCCTCCCACACCATTTTAAGACATATGCACCAGTCTCAGCCTGTAGACCAAATCGATCCTTCTAGTGATGGAATAAGCAGGGATAGGTTGAATCTGGGGGAGTAGCGGCAAAGTTTGGGGGTTTTGGCTGGACGTGAGAGATGATTCGGGTATGTTCTGCCTTGATGTCACTTCTGGAAATTTTAACTGGATCTTATGAGGGAAGTCAAGACTGATTGTTTTAGTGTCTGACCTACAAAGATATTCTGTGTGCTATGGAAATGGAATTCCTTTTATGCCACCTCTCCTGTTTTCTGTACAATTTAACACAGCCTTACACAAATCAGGAGAAAATTTGGTTCGCGTCGGGTGTGATGGCACCAGATCTGTTTTTGACACTCAGGAAGGCTGTTGATTTTGGTGGACATGATATTGATCATGTGATAGCTGATGGTCATTTGCGATTCTCCCCACTGTCAGCTAATCAGAAGTTGACTGTTGgagacatgtatttttttatttagtcatATTTTTATGTAGGAAAATGAACCCCTCTTGGTCAAGGTCAAGGTATTGGTTCTGTGTAATCAAGGTATTGGTTTTGTGTAATTAACCACCTACCTTAACTCCCTTCCAAATTATAGATATGCTTGGGTTCATTTTTCCAAGTGGACTCAGGAATATGAGCTCAGAAGTAGGTTAAATATGCATAAACGTGGTAACTATTATCTGTTTTCCACTAATGTACTTCGTGGACACAGTTTGGTATCACATTTGCACACTTTCGTTTTCCACTGCCACTTGTTCGACGGAGTGCAAAATTGTGCAGTGTCTGTAGCACACTATGGACATAGCATAGCTATCTAGTATTTGTCATCTAGAGGGAGctgcagaaaaaaaataacCTGGGGTAAATTTCCTTGCTCGCATTGTGCAGCACTGTGTTATTAGAACTAATGTTAACTCCTTCAGTGATTGAATGTGTAAGTGAGGTAGTGgtaaatgtttataaaataaacGTTGTAAATGAAAGTTTTAGTTTTAGCTAGTAGCTGCCGTATAACGTTAACGTATTTAATGTTCTCATCAACTGTCAATGCCTGAGGACTAGTTATAatgtagctaacattacctGGACAAAGCTGGAACAGACTGGCACTATAATATTTTAGGGGCAGGATAGATCGAGATTAATGTTCACTAGTTAGCTGTGAGACTCCAGGCAGGGGGGAAAATGACAGTGTATGCGTTCCACGCATTGATGCTATCACATATTTACCTCTGCCCACTTAGAAAGCAAGCCTACAACAGGTATGTTGTCAGGCCATCTCAGACCACTTTTATCAAGTTGTACCATACCCAAAAGATAGTGGAAAAAAGCACCTGTACCCAAGCCAGCATGGAAGCGGGTTGGGTTGGTTCGGTACTGTAGTGGAAAACCAGTTTATGCATGTCAATTACTGTAAACCTAATTATTTATTGACAGATGATTACAAACTCTGGAAAAGCACTGATCctattgaaaaagaaaataacatgaaaagatgctgaaatatttatgttgatttaaaaaaaacgttttgttcCTACTGAAAGAAGAGTCCTGGTAAGAATCCTGACTCCATACATTTTCTCGAGTTTGCCTTAGGTGACATCACTCTGATGCCATTCATCTCCAACTCATTTGGGCAGTTGGGTGAACTGGAGTGGACAGACATCCATTAAGGGATGTTAAACCCTGGACCCATAACCGTTTTGCCAAGACCCAAAAGTAATGATTTAATATAGAAatggtaatatatatttttagctaAAGAAAATTAAAACTGCTTGATATATTGATGTGTAATATCTCAGGTAAAAGCATGCCCGTAGGACTATTTTCTTGTATGAAGTGGCTTTTGCTGTCAAATAGTGATTGCGATTTCAATATAGGCCAATGAGCACTTTTGAAATATTAATTGATTACTTATTTCCCATGAAGGAAATAATACATATTTCTACTCAGAGCAACATTATGTACTACAAAGCCATGATTACATGATGCCTTattgacagtttttttcctATTGCTTACAAGCTATTTCTGAAACGGAAGTCACTTTTGCAAAACAGTTAACACCAGCCTCAGAACAGAATCACGTTTtgcaaaatgacacatttcacCTGCAAAATGCTCTAATGCTCTCAAAATGTTGAATACATGCCACAAAAGCAAATAAGGGCATCAAAACCGAATCATTTGTTATCTaatgaaaagtttttttatcCATCATTTCATAAAGGCACACTAAAAACCTACTATAAGCATCAATAGGACATGGTCATAGATCTGAGTCCTATTTTATGATCTCTTCTTGGGTCTTTTTTATGGTGATGCATTATACATTACAAGAGCGGAGTGGTGGAATGCAACATTGTCCCAGACCACCACAAAGATTGGCAGGTCTGGAGTCACCAGATCTCTCTCCTGGGGTGGTAGAAGTCTGTCATACAGTGCTTCGAGGAAGGTGATCAGGCGTGcagtattgtaggggccaatggtGGGGATGTGGGACATTACACCATCTCTTGAGATAGCAGCACACATGGTTATGTTTCCTCCACGTTGTCCTGGGACTTTGATTGTGGCCCACTGACCGATGATGTTCCTACCAAGTCTACGGACTTTGGACAAATTGAAGCCAGCTTCATCAACATAGATGAACATATGAAGGGCAGCGTTGGCTTCAAGCTCCATTATTGTCTGAGAAGAAAAAAGATATATTGTTAGATATTCCAGCAGTGGTCCCTACATTGCAATATTGTAAGGAAAGATTGTTGTGATGAACCCTTACCTGTACATACCGGCACCTAATCTCCTTCACCCGGTCACTGTTCCTCTCAAAGGGCACCGTATATGACTGCTTCACAGTCACCTGGTGCCAATGTAGAACCTGGTTTATTGTGGCCAGACTCACAGCGTTGATATTATTGAAGA

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2
Transcription Factors Family	ETS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF00178	Ets	Ets-domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000418	Domain	Ets domain	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-