Gene detail

Detailed information of KAJ8399471.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8399471.1	EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE	AAFF_1.1_unplaced_83	2718812	2740892	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00411830

Transcript

AAFF_T00411830

ATGGAGGGGTCCCCTGTGGCTGCAGAAACGCGATTTAGCACGTGGACACCTATCTGCAACAAGCCATCCAATCACAAGCTTTTTCAGGAAAGGACAACCCTCATATTTCACTGGTTTGACCTGTGGACTGACCATCAGAGGAAACAGTTTATTCACAGCATCCTGACAAGGTGTTCCAAATCCCAGCTTAACTTCACCAAGGACTGGTTCTTGGAAGCGGTTCCCATCACCCACTTGGACTTCACCACCGTTCTCCCACGCTTCCTCTCCCTCTACGTCCTGTCCTTCCTCAGCCCGCAGGATCTGTGCCTGGCCTCCCGGGTCAGCTGGCACTGGAAGTTCCTGGCAGAGCAGGATTGCCTCTGGACTCCAAAATGCCTGCTGCATGGCTGGTTCCTCCCCTACACCCCTAACGAGCAGGAGTATGGGGCCTGGAAGAAACACTACGTGGCCTGTGCCTCCAGCCTGGACTATCTGACCCCCCGCGAGGCCGCACCTGCCTACGGCACCCTGAACCAGCCCCTGGGGGACAAGGAGGacggggaggagaggaggagagagcaacTGATCAGACAGGCAATCAGGGAGAAGGTGGCAAAGCACAAGAGGGTCACACTGAAATCCAGAAGGCCATGGCTGAGTAGTAGCTGGACTGCAGGGACGTCCGGGGACAGGCTGCGAGCCAGTGTGGGCCAGCCAGGGCTGACAGCTGCTCTGGTGCTCATAGGGGAGAGGACCCGCACCCAGTCCTCCCTCTCCCAGCTGCTGGAGCAGGAGGCCCGACGCTGCTCCACCCCGGCCTCTGCCCTGCACCAGACCCGAGTCACGAACGCACTGAGGTCACTCCCCAAGGGGGGGAGTGTATGTGGAGGCTCCTTAACCATGTCCACTCACAGGTTACAGCCAAAACCAcagcacagcgccccctactgtcagCCTCCGCTCCATCTTCTCTTGGTGTCATCCAGAGTCCCTGCGTACGAGCTGGTGCTGTGTGGGGCGCGGGCGGGGGTGATCCCCGTGCTGTACGAACACAGCGGGACCACCCTGGAGGCCCTGCTGTCCCGGGCAGAGGGGGCGCTGCAGGGCCAGAGGGCACAGAGTATTGCCATCCTCGCTGAGGGGACCGCCGGAGAGATCAACCTAACGCAACGCTGCTGGGTCACAGAAAAGACCCTCCTGGACCCTGACATCAGAGAATTCTGGGAGAAACTGTCCGGCTGGGTGGTGCCTCTCGCAGAGGGAGGAAGGCTGGACCTCTTTGTTCCTTTAGCAGCCTCGGtAACAGGAATGGAGCTGATCTCAAAGCTCTCCTCCCTGACTGGTCTGGATGTCAGCGCTCCTACAGGGACCACCACCGGATCATACCAACACATTCTCAGCGAGTGGCTGGGACGTGGTGCGTTCCCACCCCGGGTGTATTTTGGCGAGCCCCAGCTGCTGGgctggtgcaggcaggcagAGTGGTTGCAGGACGCTCTCGTTTTGATGAGGACACAGCTGAGGCCACAGCTCCAGCAGCTGAGCGAGGAGACAAGGGGCCGTGCCCTGGGTCACCTTCTTGTGGATGTGGTTGGCCTGTCTGAGATGCACGTAGAATCCCAGGTGACCCAAGCTTTAGTGGACGGACTTGCAGCTCTTTCCAGGGAACGATGCGATGATCCACTGAGGTTCCTCGCAGAGTTCCTGCAGAGGAGACACGAGGAGGGCAGTGTGAGAGGTTCAGACAGGGCCTCCTGGACGGAGTGTGGCCCTAACGGGGCTCTCGGTCCTATAAGGGCCATCCCTCAGGGCCTGGGCGGTGCTGTGGACAGAAGAATGGCGTTGGTGGGGGAGCTGCTCCACAGCGAGAAGCTGTACGTGCGGCTCCTGCAGGCGGTTTCCCGGGTGTACTCTGACCCCCTCAGGGCCGCCCTGAACTCCAACCGAGCCATTCTCAGTTCCGCCAACGTCGTCATGGTCTTCTCTCCCGTGCTGGACATTCTGGAGGTCAACAGCCTCTTCCTGGAGGAGCTTGCGGAGCGGATGGAGGAGTGGGGTCCCGCCCAGTGCCTGGGGGACGTGCTCCTCATGCTCTGCTCCAAGCTGAGGGCCTACACCAACTTCTTCAACGGCTACCCCACCATCCTCAGGACCGTCGACAAGTGCAGGGAGATGATCCCAGCCTTCCGGGCCTTCCTGAGGAGACACGACAGGACCCTGGACACCGGTATGCTGAGTCTCCAGGAGCTCCTGCTGCTGCCCTCGTCCCGTGTATGGGAGTACGTCCCGCTGCTGGAGTCCCTGTTCCTGCTCACCCCCCCGGAGCATCCCGACCGTCCGCACCTGAGGTCTGCGCTGGACACCCTAAGCCACTACAGGAGCTTCCTCCGCAAGCTGAAAGAGAACACGGACGGAGACGCCAGGATGCTGGAAGCCCAGAGGATGATACGGAGCTGCCCAAACCTGCAGGAAGGCAACAGGCACCTGATCACAGTGCAGGAAGTGGGGCTGCTCAGTTCACCCGACGAGGCGATCGCCGCTTCACTCAGGGTGTATGAGCATGTGGGGGACCTGGGGCTGTTCCTGTTCAACGATGCTCTGGTGCTCAGCGAGCGGAGTGTCTCCCATCAGCCTTACAGTCGCTCCCGCGAGACCTCCCACACCTTCCTGGCCTCCGTCGCCCTGCACACCCTCTCCCTGCGAGATATCGCCGACACCAAGTATGTGCAGAACGCCTTCACCCTCGAAGGGCTGAAGAGGCGGTGGGTCTGTGCCACGGACAGAGAGGAGGACAAGGTCAAGTGGCTGTCTGCCTTACGGAGCGCCATCAACGCCGCCATCGGGGACAGTTAGGACCGTTTCCCagaggcggcagtgtggtataatggttagggaactgggcttgtaacattaaggttgagcaaggtacttaacctgaattgcttcagttaatatccagctgtttaaatggattgtaaagaaatgtaaactaagtcgctctggataagagcgtctgctaaatgcctgtaatgtaatgcaatgtaacaaCTGTACCcacgtggctctgtgtggctcagtaggtagagcacagtgctaacaacgcttagttgtgggtttgattcccattgggaccacatatacttatTTTTCTACCTGAGTCTTTCATCATGTTGGTCTTTCGGCACAGTTTGACCTTAAACAGAACAGTATAACAAAATCCTGTATTGCAATGTAACAAACTAGGCTGAACAAATCTTTTGTGAGTGCCGTTTATCTTCTCCCGTCCGTGTAAGTTGTTTTGTCAGATTTATTTCCAGACCTTAATTGAACTCTCCCGGTCTTTGAGCTGTCCCTAGCAGGCACCACGGAAACATCATCCCTCTCATCAAACAAGACACTGGCCCAGTGCCTGTTTTCGTTGTGATTTCTGGCTTGCTGGCAGGAAAAGTGCTAAGCAGGCAGATACTGTGTCATCAGTTTGGCATGTTCCACGTGAGAAGGCACATCCTGAGAACGTTTCCTGTTTAAAGAACTACAGAAGGCACAAACGAACCAACACGCAGCCGTCTTGCCATTACGAAAAACAAAACCGTAGTTTTGGGGTATGCCAGCAACTGCTGATGGACAaaatgatgtgttttttttaaatgcactggaAAAGCGTCCTCCCAAGATAACGTATTTAAACTTCCTCCTGCTGATATATGACAGAGAAGCTGAAGAAGCCAAGATGTGTCACGTGGGGAGCAGTTATGAAAGATTGAGACTCCAGCCTTTCAGATAAATGAAAGTTTAATCAAGTTTAAATATATGCACGAGAATCCTGCGACTCACACAACGCACCACTGATCGAACGATAGAAATCTCTcggctttacatttacatacaggtCACCTTCAACGTTTTACAGTCTTCCTTCACCAGCTATACATTGCATTCAATCCCTCCCTGTGTGCCAACCCATTTCTTCCACGGAGGGGTCCTCTTAACATTGAAGTTTAACATTATCACTGCGGAGAATAAACCTTTCAACATACCTGTAGGACGGTCAGGGCTGACGAACAGAAAGGGGAATGTAACTGGTGTGATTTGTGGATTCCTAGTACATTTTATCCCAGACATGGCAAATTGAACTGTGTGCAAATTTGATGAAGAAGAGATGAAGGTAGATTTATTGCTTCATTGTCTTTTGGGCTGTATGTGTGTAGAAGGGACTTGGAGTGCTCTTGctttaataattttaaaaaattaaaaaagtaaaacaatgtttttacctCTGTCCTTTCGCAGGGTAAAACAAGTTAAAAGCTTTATTTAACGAACATAACCCCCATTCCGCTGACCTATTCCGGTGGGAGAAGAGCGAGACAACGGTGGGAGTTACAGCGTGTCTCCTCTGGAGTCACAGTGATAATGTTAAACCAACCAGCATGACTTCCCTTACTGTAGAAAACACAGTATCCCGCCAATTAAATACACATCAaaggcatacatacatacatacacagtgtTATGTACAAACGTGGTATTGAAGGACAGAAATATCAATATGAACAATGATTCCATTTTACTGTACACGGTGTAGTATCGGATCATTTCGATCGATCAGGATGACGCTAAAAGATAGTGTTAACAATGCGTTTCTTTGGGTTTTACAGTGCCAGAGAGCAAAGCTAAAACCTGTACATCACTTATatcaatttcaattaaataaaatatatagacaCAGATTATATGCATTTAGTACAAGTTAAATGTAGAGGGCTTTGAATGACGTATGAAAACAGCCCATATCTGTATTATGAACGGAAAtaggaaaatatttatttttaaaatgtgtgatttgATGCAGGATATTTTTTCCTCATAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621	RhoGEF	RhoGEF domain	Domain	Interproscan
PF05186	Dpy-30	Dpy-30 motif	Motif	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan
PF14252	DUF4347	Domain of unknown function (DUF4347)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219	Domain	Dbl homology (DH) domain	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR007858	Conserved_site	Dpy-30 motif	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR025592	Domain	Domain of unknown function DUF4347	Interproscan
IPR035899	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR052805	Family	GEF and Ubiquitin-Proteasome Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46857	EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-