Gene detail

Detailed information of KAJ8392012.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8392012.1	FORKHEAD BOX PROTEIN M1	AAFF_1.1_unplaced_150	1524010	1530311	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00083220

ATGAGACAGAGCCCCAGGAGGCCCCTAATCCTCAAGAGGAGGAAGCTTCCCTTTCTCAAACGTGAGGCGGAAGTCCCCCGCGATGAGCCCGACGGGCTGCAGTGCAAGGCTGCACCAGTGGCCCCAGGTGAACGACATCTCCCAGACACCATTTGCATCGTGGACCACCCGTCTTTGCCCGACACACAGGTGGTGGTCATCCCCAAGACTGCAGATCTCCAGAGCATCATAGACACCCTCTCTGCCAAAGGCAAGGAATGTGGCACTCAGGGGCCCAATAAATTCATCTTGCTGAGTGGCGGGAGCGGCAGCTTGGAGGATTGGCCTAGCTCTCTGTGCTTGCCTCTGTTGGGAGAGGACAGTAATGAGAGGGCTTTTGGAAACCCCCTGAATTTCGACACAAGGCCAGAGGGAGGTGCCAGAACAGATTACCCAGTGGATACCATGCCCCTGACCACAACAAAATCATTGAATAAGGAACTGGACTGCAACCTGCTGGACGACAGTCTGACAAACATCCAGTGGCTGGGGGGGATGTGCTCTGATGGTCTGGGATCAGATGCTGGGAGGAAAGCTTCCAATAAGGAGAACCGGGAGTCCTACACCCAGCATCTCCAGACCCCCCAACATTTGGATGGGGCACAGAGGCCCCCTTACTCCTACATGGCCATGATCCAGTTTGCCATCAACAGCAAGCTGAACAGGAAGATGACCCTGAAGGAGATCTACACATGGATTGAGGACCACTTCCCTTACTTCAGAAATGTGGCCAAGCCAGGGTGGAAGAATTCCATTCGCCATAACCTGTCCCTACATGACATGTTCATCCGTGAGACTTCTCAGGACGGCAAGATTTCCTTCTGGACCATCCGTCCAGAGGCCAACCGCTGCCTGACCCTAGATCAGGTCTACAAGCCAGTGCCAGATCCAACTGCACCCCCTTCTACACAGGTCTGTGAGCAACAACAACTGAAGCCAGCTGTTCCACAACTGAGGAGGCCAACAGCTACAATCAGCTCAGAGAGGAAGATGAAGCCGCTTCTTCCTCGCACTGATTCCTACCTGGTCCCCATACAACTCTCCCTcaacccctctctcttcctgcaTCCCGCACAGCGCCCCCTAGTTGCTTCACAGCACACCTTTAGCTCTGTAGGTGCTACAGATTTCCAGGGAGGAGGCAAGAGGGTCCGTATCGCCCCAAAGTGTGCCCTGCCGCCCCCTGTGGAGGAATTGAAGGTGGAATTTAAGGAGGAATTGAAGGAGGAATTGAAGGAGgagcctctgtgtgtctccctGACCTGTGAGGCCCCAGCAGCCCCGCACCACCACCCCCAAAGAGGGGCCAGCGGCTCCCGTCGCAAGCAGTGTCTGGCCCCGCCCTCCAGAGAGGAGCCTGTGCTACTCTTTCCTGACAGCACATTCTTCGACTCGGGCCTGACCTCCGACCTCTCCGTCACTCAGGACATGCGGGACACAGAGCCCAGCAGCCCGGGAAGAGTGTACGCCTTTAAAACGCCCATCAAAGGCAGCCGCCCCACCTCCTCTACCCCCAGCAAGCCCCTCGTGGGCGAGGCCACTGTCACTCTACCCCAACCTTGGAGGACGACCCCTCAGGGTGTAGAGGGGCGCGACGTCCTGGACTTCAGCCCCATCCGCACCCCCCTGGGCACAACCCTCACCCCGCAGCACCACAGCCACGATCCCTTCAACACCACGCCCTTCAGGGAGCCGCCCCTCTTCAGCTCCCCTCGCGAACTCCTGACCTCCACCCGCTGCTCCCCGGGGACAGACCACCCACGTCCCTGCTCCCGTGAGCTGCAGATAGGGGGCTCTGCCCTGGCCAACCGCTCTCTCACTGAGGGCCTGGTCCTGGATGCCATGAACGACAGCCTGAGCAAGATCCTGGTGGACATCAGCTTCTCGGGCCTGGAGGACGAGGAGCTGGACGTCTGCAACATCAGCTGGTCACAGTTCATCCCTGAATTCAAGTGA

Transcript

AAFF_T00083220

TAGTTACCACATGACCGGAACGAGTAGGACTGCGCCAAAATTCAAATCACACCTACAAAGTGAATGGAAATCGAAAGAAGATGGTCATGGTCCAGTCTTTTATTCATATTGTTGGAAATTGATTCTAAGAAGAGAGGGATTTACGATCAACAGGACATTCTTCCAATATGAAGTCTGTCAGCCGAGTGCACAGTACCATAGACTGACATCTGACCAGGATGAGACAGAGCCCCAGGAGGCCCCTAATCCTCAAGAGGAGGAAGCTTCCCTTTCTCAAACGTGAGGCGGAAGTCCCCCGCGATGAGCCCGACGGGCTGCAGTGCAAGGCTGCACCAGTGGCCCCAGGTGAACGACATCTCCCAGACACCATTTGCATCGTGGACCACCCGTCTTTGCCCGACACACAGGTGGTGGTCATCCCCAAGACTGCAGATCTCCAGAGCATCATAGACACCCTCTCTGCCAAAGGCAAGGAATGTGGCACTCAGGGGCCCAATAAATTCATCTTGCTGAGTGGCGGGAGCGGCAGCTTGGAGGATTGGCCTAGCTCTCTGTGCTTGCCTCTGTTGGGAGAGGACAGTAATGAGAGGGCTTTTGGAAACCCCCTGAATTTCGACACAAGGCCAGAGGGAGGTGCCAGAACAGATTACCCAGTGGATACCATGCCCCTGACCACAACAAAATCATTGAATAAGGAACTGGACTGCAACCTGCTGGACGACAGTCTGACAAACATCCAGTGGCTGGGGGGGATGTGCTCTGATGGTCTGGGATCAGATGCTGGGAGGAAAGCTTCCAATAAGGAGAACCGGGAGTCCTACACCCAGCATCTCCAGACCCCCCAACATTTGGATGGGGCACAGAGGCCCCCTTACTCCTACATGGCCATGATCCAGTTTGCCATCAACAGCAAGCTGAACAGGAAGATGACCCTGAAGGAGATCTACACATGGATTGAGGACCACTTCCCTTACTTCAGAAATGTGGCCAAGCCAGGGTGGAAGAATTCCATTCGCCATAACCTGTCCCTACATGACATGTTCATCCGTGAGACTTCTCAGGACGGCAAGATTTCCTTCTGGACCATCCGTCCAGAGGCCAACCGCTGCCTGACCCTAGATCAGGTCTACAAGCCAGTGCCAGATCCAACTGCACCCCCTTCTACACAGGTCTGTGAGCAACAACAACTGAAGCCAGCTGTTCCACAACTGAGGAGGCCAACAGCTACAATCAGCTCAGAGAGGAAGATGAAGCCGCTTCTTCCTCGCACTGATTCCTACCTGGTCCCCATACAACTCTCCCTcaacccctctctcttcctgcaTCCCGCACAGCGCCCCCTAGTTGCTTCACAGCACACCTTTAGCTCTGTAGGTGCTACAGATTTCCAGGGAGGAGGCAAGAGGGTCCGTATCGCCCCAAAGTGTGCCCTGCCGCCCCCTGTGGAGGAATTGAAGGTGGAATTTAAGGAGGAATTGAAGGAGGAATTGAAGGAGgagcctctgtgtgtctccctGACCTGTGAGGCCCCAGCAGCCCCGCACCACCACCCCCAAAGAGGGGCCAGCGGCTCCCGTCGCAAGCAGTGTCTGGCCCCGCCCTCCAGAGAGGAGCCTGTGCTACTCTTTCCTGACAGCACATTCTTCGACTCGGGCCTGACCTCCGACCTCTCCGTCACTCAGGACATGCGGGACACAGAGCCCAGCAGCCCGGGAAGAGTGTACGCCTTTAAAACGCCCATCAAAGGCAGCCGCCCCACCTCCTCTACCCCCAGCAAGCCCCTCGTGGGCGAGGCCACTGTCACTCTACCCCAACCTTGGAGGACGACCCCTCAGGGTGTAGAGGGGCGCGACGTCCTGGACTTCAGCCCCATCCGCACCCCCCTGGGCACAACCCTCACCCCGCAGCACCACAGCCACGATCCCTTCAACACCACGCCCTTCAGGGAGCCGCCCCTCTTCAGCTCCCCTCGCGAACTCCTGACCTCCACCCGCTGCTCCCCGGGGACAGACCACCCACGTCCCTGCTCCCGTGAGCTGCAGATAGGGGGCTCTGCCCTGGCCAACCGCTCTCTCACTGAGGGCCTGGTCCTGGATGCCATGAACGACAGCCTGAGCAAGATCCTGGTGGACATCAGCTTCTCGGGCCTGGAGGACGAGGAGCTGGACGTCTGCAACATCAGCTGGTCACAGTTCATCCCTGAATTCAAGTGACCTGCCATGATCCCCCGCGTCCACAAGTCTCATTACCAAGCTGCTGTACACATCTTAGGCACATGAATAAGAGAAATGGATGTAGACCATGTAATATGCATCTCTATATTTTTTACTATCATTACCCTGTCTATGTGGGACCTGTCCACATTCTCGTCTTCTCTTCCTCCCTTGGTCTACCTGTCCTCTTCAGAAACCTGCCGTACATGTTTACATGccactgtatgtgtgattgagagtgtgtgtgtgtgtgtgtaccatctgccatgtttgttttgttctattGCACTGCTATCCACCCTGGACTTGGAGGAAATAGAAATAAGCACAAATAACCcagtctttcttttctttcacagTGATTTGTGAAtatacatgttttaatttgcacaTTATGAATATTTGTAGTATTTagttgtttcaaatgtaaattgggaaaaattatCCCCTAGTAGGACACTAGCATGCTAAAAGACGTGCAACCTTTTGTTAGAAGTTACACGCCAGCTTTTTATGGGATCATTTGGAGTGATTTTAGCACAATGTATATGTAATCCTATCACACCAGAACAAAGGGATCAATAAAG

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	Fork_head

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00250	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001766	Domain	Fork head domain	Interproscan
IPR018122	Conserved_site	Fork head domain conserved site1	Interproscan
IPR030456	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR042839	Family	Forkhead box protein M1	Interproscan
IPR047516	Domain	Forkhead box protein M1, forkhead domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46878	FORKHEAD BOX PROTEIN M1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000086	Biological Process	G2/M transition of mitotic cell cycle	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0042127	Biological Process	regulation of cell population proliferation	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-