| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAJ8387954.1 | COLLAGEN ALPHA | AAFF_1.1_unplaced_203 | 1508077 | 1515349 | + |
| CDS | |||||
| AAFF_T00148880 | |||||
| Transcript |
| AAFF_T00148880 |
| Protein |
| KAJ8387954.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00092 | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF10393 | Matrilin_ccoil | Trimeric coiled-coil oligomerisation domain of matrilin | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR019466 | Domain | Matrilin, coiled-coil trimerisation domain | Interproscan |
| IPR036337 | Homologous_superfamily | Matrilin, coiled-coil domain superfamily | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR050525 | Family | Extracellular Matrix Assembly and Organization | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24020 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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