Gene detail

Detailed information of KAJ8387178.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8387178.1	PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED	AAFF_1.1_unplaced_216	1062841	1087404	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00159900

Transcript

AAFF_T00159900

ATGAAGGAAAAACCAGATCATCGCGAGGAACACCTGGCACACCACAGCGTCTTCTCTCCGTCTCCATTTATCCCCCGGGGACCATGGAGTGTGAACCGAAGGACCCACCGTAGAGGAGGAGGCCGTCGCCGAGGAAAGCGAGCGGGTGCAAGAGCCAAATGTGAACCGCGGGCTCCTCTCACTACCCCGCCgactctcccctctcaaaatcGGCCGCCAGACCAGCGAGAACCGGTGTCTACACTCAGCTCTTTGTCAAGCGGAGTCTCCGTGAAATTAGGACTAGTGAACGCGAGATCCGTGAAAGAAAAAACATCGGTCTTGTCTGACTTCATCTCCAACCAAAATCTGGATTTTTTCACCATCACAGAAAATTGGCAAGTCCCAGGAGATTTCTTCGCGCTCATAGAACTCTGCCCAGTCGGCTGGAAATTTCACTGCACTCCCAGATGCGGCAAGACGGGAGGGGGCGTGGCCTTCGTGTACAAGGACAATTACACCTGTTCTATGCTGAACTGCCCCACTTTCTCCAGCTTTGAAGCTCAGCTAGTTAAAGTGGGCTCAGCTGACCCCCTCCTGGTCATTATCATCTACCGTGCGACGGACAGCAGGGTTTTTAAGGAAACTAAGAACTTTATATCTCAGTTCTCTACTTTCCTCACAGACATCATCCCCAGCCACGACAGGACACCCACCAAGTTTTCCTCCGCCTTTACCGCCGCCAAAAACACAGCAGGCGAAAAACCATCTTCAGACCCTGAGGAACTCACCATCATGTTTAACTCCACCTGCCAGTCTATCCTGGACACCATCGCCCCTCTCACCCTCAAGAAGCCCAAACCATCGGCTACCCCCTGGCTCAATGACACCACTAGAGCACAGAGGAGGATTTGGCGGCAGGCTGAGCGCAGGTGGAAGAAAGACCGGCTACAGATCTCACTGGAGATGCTCAGGGACAGCCAGCAGACCTACCAGAAAGTGGGGGTGGTGTCAGCCCCTGCTTCCATTAACATTCCATGCTTCTATTTCACTGCCGGGCTTCTACCAAACAGTAGCGCTGACCCCAACCAGACGATCGCCAAAATTGAAACGGCATTCGCAGCACTCCAGGAACAGAAAGCTGAAATCTACGAAATGGGGAAGATCGCAAAgGTGTGTGGCTGCCCTCTGTATTGGAAGGCCGCGCTGTTCCATGGTGCCGGAGGTGATCGGACTGGATCTGTCTCCACCCAGATGTTTGTTGCGATGTGGAGGAAATTGCTGCACAGTTGCTATGACGACTCAACCAAGTTTGTTTACCTACTAGCCAAACCAGGCTGCAAATACCTGGAGCAGGAGGATTTCATCCCGCTATTACAGGACATTGTGGACACACACCCAGGGCTGACTTTTCTGAAGGATGCTCCTGAATTCCACTCCCGGTACATTACCACGGTGATTCAGAGGATATTCTACACTGTCAACCGCTCCTGGACGGGTAGGGTTACCGGGACGGAGCTACGGAGGAGCAACTTCCTGCAGACTGTAGCTCTCctagaggaagaggaggacatCAACCTGATCACAGACTACTTCTCCTACGAGCACTTCTATGTCATTTACGTCAAGTTCTGGGAACTGGATGTTAACCATGACCTCTTTATCGACCAGAAAGACCTGCGCAGATATAATGACCACGCCTTGTCAAACAAGATTATCGAGCGGCTTTTTTCTGGAGCTGTTATGAAGGGAGGCTGCGCACAGAGAGAGTGCAAGATGAGTTATGCTGAATTTGTTTGGTACCTCATCTCTGAAGAAGACAAGAAGAACTTCACCAGTATAGAGTACTGGTTCCGATGCATGGACCTGGATGGGGACGGGGTTCTCTCCATGTACGAGCTTCAGTTCTTCTATAATGAGCAGTGCAAGCGCATGGAAACCATGGGCATCGAGCCCCTGCCCTTCAATGACCTACTGTGCCAGATGCTGGACCTAGTCAAGCCTAAGCAACAGGGTAAAATAACCTTGAGTGACCTGAAGAGGTGCCAGATGGCACACATATTCTACGACACCTTCTTCAACCTGGAGAAGTACCTGGACCATGAGCAGGGGGATACTTTTACAGTTCAAAAGGACATGGAtagtgatgtcacagagctCTCAGACTGGGAGAAGTTTGCAGCTGACGAGTATGAGGTCCTGGTTGCTGAGGATACGGCCAGTGATCCCCAACTGGATGGGTCTTTTGAGGATGACTGTGAATCTGAAGAATGTATGGTCACATCCGAAACAGGGAATAAGATGGACAAGACAGAAGAGATCCTCATCTCCAAACTGTCTGTGTGAGCCCTGAGATCGACCTCTACTTGGCCTCCACCTCATTGCCCCCACAACTGCTATCCCTGGCCATTCTCCAGAAGGAGGAACAGAAGAGGAAACAGAAGAGTAAACAGGAGGGAGAAACAGAAGGAGGAACagaaggggaaagggggaaCAGAAGGAGGAACAGGATGAGGAACAGAGGGAGGAACCTAAGGGGGAACAGGATGAGGGAATGGATGGAGGAACAGAGGGAAAaacaggagggaggaggggaaagaTAAAGGGAAAAGAAGACAGAGCAGGAGTAAGAACAGAAGGGGGAACAGAAAGAGGAACAAAAGGGTCAACAGGCAGGGGAACAGAAGGGGGTAAGGCTCTGCACTCGAGATTTCCTCTCTTTTAACAAGAGCAACCAAGTTGCTTCCAAACCAAATGTCCCTCTTTCCTGAGCAGAAATAGCTCATTCCTGTCTGTTGAGAGTTTTTGATCTCTAggatctgttttgtttgtttgtttgatttgatttgattgtttGAGCTACTTGTGGATTTCTTCATCACGTGTCAAAGGCctctttaaaatatgtttttcttaaaTCTAAAGTTAAATCTGTACTTTGTGGCTGCGTATGCGAGGAAGGTGAGGTTTATGTGATAAGTCAGCCTTTATAAAGCATTATTTTTAAGGAAGTGGGGCCCAGTTCTCCACAGTAGTGTGAGTAGAAATCTGAACACTCCTGTCTCCTGTACATTTTTATCATTGCAAACAGAGTCATTAGAGTCATGTGAGGGGTTGTGAAGTGTGGTCTTTTGCACAACTCTGTGGTAAAATACAGTAATGCACCCATGATTCAGCTGACATTGTATAACTGAAGCCCTCTTCTCCTACATGGCATGGCCTGGTCCAGACATTTGGGATCTTTAGAAAACCAAACCAGAGTTGTGGAGCCCAGTTTAGCTGGACTAACCAGAAGGTTACTGGTTGCCTCCCAGATTGGATGCTAATGTTGTATGTTTCTGCGTGGGGCTTAAACCAAATGTATTGCTGTGAATATGCAATTCGTCTTGATCAGGTTCCTGTATTGATAAAGTGAAATAAACAACAGATGAGCGTAGTTTAATTTATACAAACCCAAAGCAAGAGATCTATTTTAGCCGTGAACAAAGAAGTGATGTAACTCACTTAAGTATTATACAGAtcatggagggagggatgggttTTAGTGTAGGTTTGGATTATCTCTTTAAGAAGACAgaaattacttttattttgcattctGTCTCAGATATTGGTGCCCTATGTGTCTACGATCATTCAGGTTCACACAAATCAAACTGATTTCCACTAATTTATCAGTTTGtcctctttcattctctctctttccctcttgcTTTTtatctctttctccttccctctctctcctccttttcttgcctctctctctctcacaatctacctctctgcccctctctttctttctgtctttctctttctttcactcaATCACTATTGCTTCTGGGTAACCGCTTAATAAACCCTTCACCACCAATTATTTAGTTTTATCCAAACTATATATATGGCCATGTAATTATTGTAAGTTGTTTGACTTTAATCCTATTGCATAATTgcaatttgtttaaatgtttaaacacGTGCATCATTTAGTGCTGTGTAGAACGGTTGTTTGCGatgttttatataaatgtttGTGTTGTTGTAATCCAGTGTGCCACTGAGTGGCATCGTGATAATATTACTGACTGCCACATGCTATGCGATGTGCCTCAAGCTATAAGGCTGAACATTTATATTATGGGGGATTCTATGGGAATTATCTGTATGAAGACAATCAACTGGGgggattttatttgtatttgtattttaatgtgtAAAGAAATCACTTCTGATTACTTTTGGTACCTTTTGAAGCAATACAACTGCTGTAACGATACTTGTTTTTGGTATGACATTCATCAGACAAACAGCCAATATTCAAAACTTGAAGTAGTAGTGTGTTTAAGCCAGGGGCTCCATAGAGTCACAGAGTGtgctgctttttattttcaccttaaaatcagtatCCAATTCAGATCCAAAAAAGAGTGGGCTTAATATGTAATTAACTGCTTTAATTAAGGCCTGGGTTACAaagaccagcagaccctgtgactctccaggaccagagttagGTACGCTTGGTTTAAACTCTATGCAAATAAAGGTGTTTGTGCAGGAATTATGTCTGTGAAAGTTGTAGCATGGCAGCTGAAGTTACAGGCTTATCCAGGTGGTTTTCCACATTGGATCATATCTCTAGTGTGAGCTTTACCTGCTGATTCTGTGGACATTGCTGGGTGATTGCCCATCTTGCTGTGATAAAATGAGACAATGCTTGTTTTGGCATGGCAAttagtttttccccccaatttctttggaatcatgaaataaaatatcaagGCATTTTAAATTCTATATGTTCAGGTACACataacctacaggtaactg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF17958	EF-hand_13	EF-hand domain	Domain	Interproscan
PF21161	P2R3B_EF-hand	P2R3B, EF-hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR041534	Domain	PP2A regulatory subunit B'', EF-hand domain	Interproscan
IPR048855	Domain	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha/beta/delta, EF-hand	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14095	PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000159	Cellular Component	protein phosphatase type 2A complex	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0019888	Molecular Function	protein phosphatase regulator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-