Gene detail

Detailed information of KAJ8385883.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8385883.1	ADHESION G-PROTEIN COUPLED RECEPTOR	AAFF_1.1_unplaced_239	775266	868946	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00179490

ATGAACCATGTTTGTTTCCCACTGCTATTGGGCTCTCTGCTTTCGTTACTATCCTGTAGTCTTGAAGAAGGGGAAGAAAATGTAGCCTTTGGTAAGAAGGCCACTCAATCAACCAGTACTAATGCATACAAGGCAATTGATGGGAAACGCAACACAAGATATACAGATGGTTCCTGCACTCACACATGGGGAGACAGTCTCCCCTGGTGGAGAGTGGACCTGCTGCATTCTCACAAGGTCACATCTGTGGCTATTACTAACAGAGGGGACTGCTGTCCTGAGAGGATTAATGGAGCTGAGATTCACATTGGAAATTCCCTGTATAACAATGGCAACAGTAATCCAGTGTGTGCTGTGGTACCCCAAATCCCAGCAGGACAAACCACAACCTATGAATGCCAAGGGATGGAGGGACGCTACGTCAACATATTCATCCCCAAGCTAGCAGTTCTAACTCTGTGTGAAGTGGAGGTCTATGGCAATCTGATTCATGAAGCTAACTTTGCCATCCATCACAGCAACTGTAACCTGACCTCCTGTGGACCACTTGCACAGTGCACCAGCGATGGGGGCTGTGTCTGCAGTCCAGGATACAGGTTACCTGTGGACATACTGCCAAATTCTGACTCTTATGGATGTGCAGACATTGATGAATGTGTGGAGGAGTCCACCATCTGTGGTCCCAATGCTACCTGCACCAACACTCCTGGGGGTCACACCTGCACCTGTCATCAAGGGTATCTTGTTATCCCACCAGACTCCATGGCCAGCACCTCAAACCCCTGCCAAGATGTGGATGAGTGCAGCCAAAGCACATGTGGCTCCAACGCTGTGTGCTACAACACTGTAGGAGGCTACTACTGCTCCTGCCAGGATGGTTACATGTCTTCTACTGATCTTAACTGGGAATTTGGGGTTACTCTGTGTCAGAGCGCACAAGAACATCTTCACTCACTAACCCCTCCAGAGGGCCAGTCACCAGAGATATTCTTTCTCAACAAACTGAGCCAGGAGTTGGAGAACAACCCTGACATAATTCTAGCTGAGGGGACAGTGACTAGTGTCCTGACCACAGCCCTCTTAGTCACAGACAACATGTCCCCCGAGGATGGAGAGGACAATAGTGCAGAGGCTGCCAGTGTCATCCTGAAGATCTCTGAGAGGCTGGTGTCTGCTTTGGTTGAGCCCACCAAGACACAGTCCAAAAAAACTGTGAAGACACCTTCCATGGAAATTAATATACATGTCATTGGACCTGAAGGGAATATAACCGAGGTTCCTGCACTCAATGCAAAGGAAAACATAATGACAATCAATCTTCCAGCTATTGCTAaaaataacaatgGATCTGTTGCTGCAGTGCTGATGTCTGTTAGTGGGATGGAGAAGCTCATGAGCCCCAGTTTCTTCAGGACCGAAAATGTCACAGAAATGTATTCTGACATCATCACCGCCACACTGCTCAAGACCAACGACACAGAGCTCCCTGAGCCTGTCAACTTCACCATTCACCACAAGAAGAAGTACCAAGCTGGGTTGGTGACCTGTGTGTACTGGGAAGACAAGGGATTGGAGAAGCACTGGTCAGTAAAGGGGTGCACGGCCTCCTTCTCTGATGAAAACCACACGGTATGCAGCTGTACCCACCTCTCCACCTTCGCCATACTTCTGCAGACAGAGGAACAGCATGCCAAAGAGGGTGATCCTCTGCTGGAGTGGATCAACctggtctgtatgtgtgtgggccTGGCGTTCCTCGCCCTTGCTATCCTCTCCTTCCTGTTCTGCAGCTGGAACCCTAAGATCAACAATACTGCCCGCCTCCACCTCAGTATCTGCCTCTTCTCAGCTCACCTGCTCTTCATGGTGGGCATGTCTCAAACCGAAAATACAGTGCTGTGTGCAGTAATTGCAGGCATGCtgcacttcctcttcctgtccaGCTTTGTGTGGATGTTACTGGAGACAGTGCAACTCTTCCTGCTGGTCAGGTGCCTGGCCAAAGTGCAGGTCATCCAGAGGGAGGGGCTAGAATCATGGTACCTCCTGCTAATTGGCTACGGAGCtcctgtggtggtggtgggagtaTCAGCAGGGGTGTTTTCAGATGGTTATGGCAGCAAAGAACAGTGCTGGTTGGAAAAAGATAAAAACTTCCAGTGGAGTTTTATTGGTCCAGTGTGCTCTATTCTCGCACTCAACCTGGTCTCTTTTTGTGTGATTATCTGGAGCCTGAAGCCTACTCTAGTCAACATGAAGAGTAACATATCCCAGGCAAGAGACAcaaggctgATTGTCTTCAAAATTGTGGCCCAGTTTTTCATCTTGGGGTGTGCCTGGATTCTGGGATTTTTCCAAAGCAGCACTGTGTTAAAATACCTCTTCATCGTCCTCAACTCACAGCAGGGCACCTTCATTTTTGTTGTACATTGTCTGCTCAATAAAGAGGTGCGAGAGGAGTACAGAAGGTGGCTGACATGTCTGTGTAGAGCAGAGGAGCCCTCACAAACCCCTACATGCATGAATATTGTTAATGACTCTGTGAAGGCTGCATCCCCATCCACAGAGGAAATGGACAAGGTCTCATAA

Transcript

AAFF_T00179490

GTCAGCTGTTGTGGAGCTTCAATATTCTCACTGTCAAAGGAAGAACCAGCAAAGATGAACCATGTTTGTTTCCCACTGCTATTGGGCTCTCTGCTTTCGTTACTATCCTGTAGTCTTGAAGAAGGGGAAGAAAATGTAGCCTTTGGTAAGAAGGCCACTCAATCAACCAGTACTAATGCATACAAGGCAATTGATGGGAAACGCAACACAAGATATACAGATGGTTCCTGCACTCACACATGGGGAGACAGTCTCCCCTGGTGGAGAGTGGACCTGCTGCATTCTCACAAGGTCACATCTGTGGCTATTACTAACAGAGGGGACTGCTGTCCTGAGAGGATTAATGGAGCTGAGATTCACATTGGAAATTCCCTGTATAACAATGGCAACAGTAATCCAGTGTGTGCTGTGGTACCCCAAATCCCAGCAGGACAAACCACAACCTATGAATGCCAAGGGATGGAGGGACGCTACGTCAACATATTCATCCCCAAGCTAGCAGTTCTAACTCTGTGTGAAGTGGAGGTCTATGGCAATCTGATTCATGAAGCTAACTTTGCCATCCATCACAGCAACTGTAACCTGACCTCCTGTGGACCACTTGCACAGTGCACCAGCGATGGGGGCTGTGTCTGCAGTCCAGGATACAGGTTACCTGTGGACATACTGCCAAATTCTGACTCTTATGGATGTGCAGACATTGATGAATGTGTGGAGGAGTCCACCATCTGTGGTCCCAATGCTACCTGCACCAACACTCCTGGGGGTCACACCTGCACCTGTCATCAAGGGTATCTTGTTATCCCACCAGACTCCATGGCCAGCACCTCAAACCCCTGCCAAGATGTGGATGAGTGCAGCCAAAGCACATGTGGCTCCAACGCTGTGTGCTACAACACTGTAGGAGGCTACTACTGCTCCTGCCAGGATGGTTACATGTCTTCTACTGATCTTAACTGGGAATTTGGGGTTACTCTGTGTCAGAGCGCACAAGAACATCTTCACTCACTAACCCCTCCAGAGGGCCAGTCACCAGAGATATTCTTTCTCAACAAACTGAGCCAGGAGTTGGAGAACAACCCTGACATAATTCTAGCTGAGGGGACAGTGACTAGTGTCCTGACCACAGCCCTCTTAGTCACAGACAACATGTCCCCCGAGGATGGAGAGGACAATAGTGCAGAGGCTGCCAGTGTCATCCTGAAGATCTCTGAGAGGCTGGTGTCTGCTTTGGTTGAGCCCACCAAGACACAGTCCAAAAAAACTGTGAAGACACCTTCCATGGAAATTAATATACATGTCATTGGACCTGAAGGGAATATAACCGAGGTTCCTGCACTCAATGCAAAGGAAAACATAATGACAATCAATCTTCCAGCTATTGCTAaaaataacaatgGATCTGTTGCTGCAGTGCTGATGTCTGTTAGTGGGATGGAGAAGCTCATGAGCCCCAGTTTCTTCAGGACCGAAAATGTCACAGAAATGTATTCTGACATCATCACCGCCACACTGCTCAAGACCAACGACACAGAGCTCCCTGAGCCTGTCAACTTCACCATTCACCACAAGAAGAAGTACCAAGCTGGGTTGGTGACCTGTGTGTACTGGGAAGACAAGGGATTGGAGAAGCACTGGTCAGTAAAGGGGTGCACGGCCTCCTTCTCTGATGAAAACCACACGGTATGCAGCTGTACCCACCTCTCCACCTTCGCCATACTTCTGCAGACAGAGGAACAGCATGCCAAAGAGGGTGATCCTCTGCTGGAGTGGATCAACctggtctgtatgtgtgtgggccTGGCGTTCCTCGCCCTTGCTATCCTCTCCTTCCTGTTCTGCAGCTGGAACCCTAAGATCAACAATACTGCCCGCCTCCACCTCAGTATCTGCCTCTTCTCAGCTCACCTGCTCTTCATGGTGGGCATGTCTCAAACCGAAAATACAGTGCTGTGTGCAGTAATTGCAGGCATGCtgcacttcctcttcctgtccaGCTTTGTGTGGATGTTACTGGAGACAGTGCAACTCTTCCTGCTGGTCAGGTGCCTGGCCAAAGTGCAGGTCATCCAGAGGGAGGGGCTAGAATCATGGTACCTCCTGCTAATTGGCTACGGAGCtcctgtggtggtggtgggagtaTCAGCAGGGGTGTTTTCAGATGGTTATGGCAGCAAAGAACAGTGCTGGTTGGAAAAAGATAAAAACTTCCAGTGGAGTTTTATTGGTCCAGTGTGCTCTATTCTCGCACTCAACCTGGTCTCTTTTTGTGTGATTATCTGGAGCCTGAAGCCTACTCTAGTCAACATGAAGAGTAACATATCCCAGGCAAGAGACAcaaggctgATTGTCTTCAAAATTGTGGCCCAGTTTTTCATCTTGGGGTGTGCCTGGATTCTGGGATTTTTCCAAAGCAGCACTGTGTTAAAATACCTCTTCATCGTCCTCAACTCACAGCAGGGCACCTTCATTTTTGTTGTACATTGTCTGCTCAATAAAGAGGTGCGAGAGGAGTACAGAAGGTGGCTGACATGTCTGTGTAGAGCAGAGGAGCCCTCACAAACCCCTACATGCATGAATATTGTTAATGACTCTGTGAAGGCTGCATCCCCATCCACAGAGGAAATGGACAAGGTCTCATAAATGATCGCCtgacaaatggaaataatgttttttttaaatgtatcttttggactctaataaaataaaataaaataaatgacaagtTTACACTTTATACCACAAGTGCAATTGCCACTTAACATGAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR001740	Family	GPCR family 2, EMR1-like receptor	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR006585	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-