Gene detail

Detailed information of KAJ8378785.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8378785.1	MYOTUBULARIN-RELATED	AAFF_1.1_unplaced_310	102205	190675	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00236020

ATGTATCCCGCATCACGCTCAGATCCACGCGTGCGGGGGCGTGACACTGTGAGCTCCCTACACTCACGACATTGTGAGCTCCTCTACACTCACCACACTGTGAGCTCCCTACACTCACGACACTGTGAGCTCCTCTACACTCACCACACTCTCCCTACACTCACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTGTGAGCTCCCTACACTCTGACACTCTGTTTCCTGGGGCCCCATCCCCACGCGCACGGCGTCTCGGAGCGCGCGCCTCGTGCGCGAAATGTATTAACGTGCCGGCGCACGTGCGACGCCGGCGGCGCCTCTCGGCAGATCGGGACGCCTCACGCGGAAGCGCCAGCTGGATCCGACGCAACTGCGAAGAGCTGATTGGCGACGGATGGATCCCACGCGGGCCCCACGTGCAGTCACCTCCACAACCAGAGCTCGCTCCTGTGGCGCCCGCCTTTCCCGCCGCGCTGAAGCGGAGACGCGACGATGACCGCACGGGAACGCGAGGAAGAGCAGAGTTCAGTCAGTCTTCCACGGCCTTGGAACTCGAGAACAaggcggtggtgcagtggatagcgctgtcgcctcacagcaagaaggttctgggtttgaatcctggccgggggcctttctgtgtggagtttgcatgttctcccgtgtccgcgtgggtttcctccgggtactccggtttcctcccacagtccaaagacatgcacgtacggtgtgcagctgccagcaatgatgtctatcgctgtgttactgcactgatcaacAATGAGAAAACACTTTACCGTGACGATCTCAGCCCCTACTGTCGCACTAACCGGGTGACGCCTCTTCTGTCTTGGAACATAAGCGTGGCAGAATTCTGGCGCGCTCCGGTTTCCTGCGTTGCGATGGAGTTTGCGGAGCTGATTAAGACTCCGCGCGTGGACGGCGTGGTGCTGCACCGGCCCTTCCTGCCCACGGTGGAGGGCACGCTGTGTTTGACGGGCCACCATCTCATCCTGTCCTCCCGCCAGGACAACACGGAGGAGCTGTGGCTCCTGCACTCCAACATCGACTCCATCGAgaagagGTTTGTGGGCTCCCTGGGCACGATCATCGTTAAGTGCAAAGACCTGCGGGTGATCCAGCTGGACGTCCCCGGCATGGAGGAGAGCCTGAACATCGCCAGCTCCATCGAGGCCTTATCTACTCTGGACTCTGTGTCCCTCCTCTACCCCTTCTTCTACCGGCCCATGTTCGAGGTCATTGAGGACGGCTGGAACTCATTCATGCCCGAGGACGCCTTCAAGAACATCGAGTCTGTGACGGACGAGTGGAGGCTGAGCAGTGTGAATCAGGACTTCAGCGTGTGCCCCTCCTACCCCCCCCTGCTGGTGGTGCCCAAGGCCGTGGACGACGACACCCTCCGCAAGGCAGCCTCGTTCCGGCACGGAGGCCGCCTCCCCGTCCTCAGCTACTACCACAGGAAGAACGGCATGGTGATGATGCGGGCAGGCCAGCCCCTGACCGGCACTAACGGGCGGCGCTGTAAGGAGGATGAGAAGCTGATCAACGCCACGCTGCGCGCGGGGAAGCGCGGTTACATCATTGACACTCGCACCGTGAGCCTGGCGCAGCAGGCCAAGGCCCGGGGGGGCGGGTTCGAGCAGGAGGCCAGCTACCCACAGTGGAGGAGGATCCACAAGGCCATCGAGAGGTGGGGTCTGCTGCAGGACAGCCTCATTAAACTGGTGGAGGCGTGTAATGACCAGTCTCCCAGCGTGGATCGCTGGCTCAGCAAGCTGGAGGCGTCCAGCTGGCACACACACGTCAAAGAGATCCTGACCGCAGCCTGCCTGGCAGCGCAGTGTATCGACAGGGAGGGGGCGTCGGTTCTGGTCCATGGCAGTGAGGGGACGGACTCCACGCTGCAGGTCACGGCTCTGGCCCAGATCATCCTGGACCCGGCCTCCAGAACCGTGCGCGGGTTCCAGTGCCTCGTGGAGCGCGAGTGGCTGCAGGCGGGTCACCCGTTCCAGCAGCGCTGTGCCCAGTCAGCGTACTCCGTGGGGAAGTGCCGCTGGGAGGCCCcggtcttcctcctcttcctggacTGCGTGTGGCAGATCCTGCGCCAGTTCCCCTGCTCCTTCCAGTTCAGCGAGAACTTCCTGGTCCTGCTGTTCCAGCACTCCTACGCCTCCCAGTTCGGCACCTTCATGGGGAACAACGCTGCTGAGCGcgTGAAGCTGAAGCTCTCTCAGAAGACGGTGTCTCTCTGGTCCTGGGTGAATCGGCCGCAGGAGGTGGAGCGTTTCCTGAACCCTCTGTACGAACCCAACAGCCTGGTCATCTGGCCCTCCGTCGCCCCGCAGAGCCTGCTGCTGTGGGAGGcggTGTTCCTGCGGTGGAACCGCTCCTCTAACAACTCGCCCAATTACAGGCTGAGGACTGCCTGCTGGACACGCCCTaAGAGCTGGTGCCTCCAGACAGAATGCAGCGAGGCCACATATCTGCACAACCTGTACTGCAGCAATCCTGCGCTCATGAAAACCAGGCTTTCCACGCAAACtggttacaacgtccgacgctggccacggagaccggggttcaattccccgtctcaccaagtgtcggctttggccgggagtgccaccaggggcggcgattggctgtccgccccagggagggggagggaagccgacgtgacgttcgctgcgtatagtggccctCCTGTCTCCTCCTGCAGTCATGTGCGTTcagcctgccccccccacccacccccttggGGGACGTTTGGCAGGCAGCCTGTCTCCGATGTCCCGTCCCGCGATCACGTGGACGCTCCAGCCCTGCTGTCGTGGATTTTAACACTGACCCACATTCGCTCCAGgggaggggggagggtgagccggctcgggtccgccgtgaagcacgtaagggagtcccCAGAACGtgggggggtgaattccgtctcaaaggaagcagagtttgctgcccttggagaattagcttgcctcgtagagacgagcggcagactcctgtggggaggCGGACTGAAGATGCGGATCGTGCGCGCCCTGAGCAGAGTGGCCAGACAGGCCCTGCTGGCCCCGCCCTGTGGGTGCCAGCCCCTGGCGACCCCAAAGTGCGCATCACAGGTGGGACTCCTGAACATCAGCTTCTCCCGCACACAAGTCACCTCCGACGCCAGCTTCCACTCCGTCTCCTTCTCCGAGACCGACCACCCCAAAGTGCTCATCACAGGATGCAGTGAAATTCAgggtcTGGGTCAGCTTGGGGTCGGCCTGGCCAAGCTGCTGAGGAAGAGGTTTGGGAAGAACAACGTGATTCTGTCCGACATCCGGAAACCTCCGAGCCACGTGTTCCACAGCGgccCCCCCTTCATCTACTCAGACATCCTGGACTACAAGAACCTGCGTGAGATTGTGGTGAATAACCGCATCACATGGCTGGTGCACTATAGCGCCCTGCTCAGCGCGGTGGGGGAAGGCCAACGTTTGCACAACATCCTGGACATCGCGGCGGAGCATGGCCTGCGTCTGTTTGTCCCGAGCACCATCGGCGCCTTCGGGCCCACCTCCCCGCGGAACCCCACCCCCGACCTGTGCGTGCAGCGCCCGCGCACCATCTACGGCGTGTCCAAGGTCCACGCCGAGCTCATGGGAGAGtATTATCATCACCGGTATGGTCTGGATTTCCGCTGTCTGAGATATCCGGGCATCATCTCCGCCGACTCGCAGCCGGGCGGAGGGACCACCGACTACGCGGTGCAGATCTTCCATGACGCGGTGAAGACGGGGAAGTTTGAGTGCAACCTGAAGCCGGACACGCAGCTGCCCATGATGTACATCGAGGACTGCCTCCGCGCCACGCTCGAGGTGATGGAGGCGCCCGCAGACACGCTGAGCATGCGCACGTACAACATCAACGCCATGAGCTTCACCCCCGAGGAGCTGGCGCGCGAGGTGCAGAGACAGCTGCCCGACCTGCAGGTCACCTACCACATCGACCCCGTCCGCCAGGCCATCGCGGACAGCTGGCCCATGAACTTCGACGATGACAACGCGCGCGGGACTGGGGCTGGAAGCACGAGGGCGCTAGATGATGACCTCCACAGCAGACAGGAAAGACTTGCTGCCACTCATAGCATCGCGAGAACAGCCATTGTTGTGAAACGGAGTGCATGGGACGCCAGTACTAGCGCGCTATCCCAGCTCAACGCAGTGTCTGGATTGCAGGTTCAgatcccaggtgaggcactgcagGTGTACCCTTTGACCAAGGTGCGTAACCTGAACCACTTTAGCCGACCCCCGGGCTCAGGAGGAGAGTGGGTGCACCTCCACTGTGAGGCCAGCCTGGAGAGGAACAGACCCATGTCTGTGCCCCAGCACACTCAGCGCAGACCGCTGGtgaactgtagccgactctggcgcgacggGGGTGTTCTACAGCGTCGTCCTGAGGGAGGTAACTCAGATTgggagtggagggggtgtttagttgcccactgcggccggTTCACGCTCGGGGCGGGCGGGGATGGCGGGGGGGCGTCCCAAAGGAGGCATTTCGCCGTCCCAGAGCAGCGActgaacgacctgcttgatcctaaccaatctggggctcgcgaagggctcccgatgattgatgcgtcaatcaccgtggaaggctccatagtactgactgccccatccctccgggcgcctggcagccgctcctcgcggtctcgcctcttctctgtcctgGACCCCAAGATGGCGATGCTCGCAGAACCCCGCAGGAAGCAGAAGTGGTCTGTGGACCCCAGGAACAGCGCCTGGAGCAAAGATGAGTCCAGATTCGGCCAGAAGATACTGGAGAGGATGGGCTGGTCCAAAGGAAAGGGTCTGGGGAAGAGTGAGCAGGGCAGTACGGAGCACATCAGGGTGAAGCAGAAGAATAACAGCTTGGGGCTCGGGACCGCAGCCAATCACGAGGACGACTGGATCTCCCATCAGGATGATTTTAACCAGCTGCTCGCCGATCTCAACAGCTGCCACGGCCAGAGCGGTCCCGCAGCCGAGCAGAAGCAGAGCTTCAGTCTGGAGGAGAAGTCGAAGACGTCCAGGAAGAGGGTCCACTACATGAAGTTCACCAAAGGGAAGGACCTGTCCGGCCGCAGTGAGACAGACCTGGCCTGCATCTTcggcaagaggaggaggaaggagcaCTCCAGAGACCAGGGGGGGgAGAGcagtggccaggagtcccaggaaGAGAAGGAGATCGGTGAAGCAGCAGGAGAGGTCGTGACCCCTGACCCGGAAGTGGATGCCACCGTGAACACGGTGACCAGCGCCCTCACCATGCAGGAGTACTTCGCCCAGAGGATGGCCCAGCGGAAGGGAAGACATGCCCCCGAGACCAGCTGCCACGCCCAGGACACGCCCCCCGCGGCAGAGACAGCCACggccaagaagaagaagaagaaaaggaggGATCGTGGAGAAGAGGGGGATGAGATGGAGGTagaggcgggggtgggggccGGGGCGGGGGTCGAGGACAGCGCTGTTTCCCACGGGACGGAGGAGGAGAGCGCCATGGTcaggaaggagaagaagaagaagaagaagaagaagaacaaagGGAAGCGTgcggatggagggatggagggagatgAGTGCGGCGTTTCGTGCGGGAGCCCGGATCAGGGCCCAGAGGAACCCAGACGCCGTCCCGAGGCGCTAGACAGCGCCCTGAACATGGAGCCCGAGAGCGGCCGcaagctgaggagagaggagggagaggagccgGCGGAGGAAGAGCAGAGAAAACCTCAAAaagacaagaagaagaagaggaggaaacaTGATTGA

Transcript

AAFF_T00236020

Protein

KAJ8378785.1

MYPASRSDPRVRGRDTVSSLHSRHCELLYTHHTVSSLHSRHCELLYTHHTLPTLTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTVSSLHSDTLFPGAPSPRARRLGARASCAKCINVPAHVRRRRRLSADRDASRGSASWIRRNCEELIGDGWIPRGPHVQSPPQPELAPVAPAFPAALKRRRDDDRTGTRGRAEFSQSSTALELENKAVVQWIALSPHSKKVLGLNPGRGPFCVEFACSPVSAWVSSGYSGFLPQSKDMHVRCAAASNDVYRCVTALINNEKTLYRDDLSPYCRTNRVTPLLSWNISVAEFWRAPVSCVAMEFAELIKTPRVDGVVLHRPFLPTVEGTLCLTGHHLILSSRQDNTEELWLLHSNIDSIEKRFVGSLGTIIVKCKDLRVIQLDVPGMEESLNIASSIEALSTLDSVSLLYPFFYRPMFEVIEDGWNSFMPEDAFKNIESVTDEWRLSSVNQDFSVCPSYPPLLVVPKAVDDDTLRKAASFRHGGRLPVLSYYHRKNGMVMMRAGQPLTGTNGRRCKEDEKLINATLRAGKRGYIIDTRTVSLAQQAKARGGGFEQEASYPQWRRIHKAIERWGLLQDSLIKLVEACNDQSPSVDRWLSKLEASSWHTHVKEILTAACLAAQCIDREGASVLVHGSEGTDSTLQVTALAQIILDPASRTVRGFQCLVEREWLQAGHPFQQRCAQSAYSVGKCRWEAPVFLLFLDCVWQILRQFPCSFQFSENFLVLLFQHSYASQFGTFMGNNAAERVKLKLSQKTVSLWSWVNRPQEVERFLNPLYEPNSLVIWPSVAPQSLLLWEAVFLRWNRSSNNSPNYRLRTACWTRPKSWCLQTECSEATYLHNLYCSNPALMKTRLSTQTGYNVRRWPRRPGFNSPSHQVSALAGSATRGGDWLSAPGRGREADVTFAAYSGPPVSSCSHVRSACPPHPPPWGTFGRQPVSDVPSRDHVDAPALLSWILTLTHIRSRGGGRVSRLGSAVKHVRESPERGGVNSVSKEAEFAALGELACLVETSGRLLWGGGLKMRIVRALSRVARQALLAPPCGCQPLATPKCASQVGLLNISFSRTQVTSDASFHSVSFSETDHPKVLITGCSEIQGLGQLGVGLAKLLRKRFGKNNVILSDIRKPPSHVFHSGPPFIYSDILDYKNLREIVVNNRITWLVHYSALLSAVGEGQRLHNILDIAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHAELMGEYYHHRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHDAVKTGKFECNLKPDTQLPMMYIEDCLRATLEVMEAPADTLSMRTYNINAMSFTPEELAREVQRQLPDLQVTYHIDPVRQAIADSWPMNFDDDNARGTGAGSTRALDDDLHSRQERLAATHSIARTAIVVKRSAWDASTSALSQLNAVSGLQVQIPGEALQVYPLTKVRNLNHFSRPPGSGGEWVHLHCEASLERNRPMSVPQHTQRRPLVNCSRLWRDGGVLQRRPEGGNSDWEWRGCLVAHCGRFTLGAGGDGGGASQRRHFAVPEQRLNDLLDPNQSGAREGLPMIDASITVEGSIVLTAPSLRAPGSRSSRSRLFSVLDPKMAMLAEPRRKQKWSVDPRNSAWSKDESRFGQKILERMGWSKGKGLGKSEQGSTEHIRVKQKNNSLGLGTAANHEDDWISHQDDFNQLLADLNSCHGQSGPAAEQKQSFSLEEKSKTSRKRVHYMKFTKGKDLSGRSETDLACIFGKRRRKEHSRDQGGESSGQESQEEKEIGEAAGEVVTPDPEVDATVNTVTSALTMQEYFAQRMAQRKGRHAPETSCHAQDTPPAAETATAKKKKKKRRDRGEEGDEMEVEAGVGAGAGVEDSAVSHGTEEESAMVRKEKKKKKKKKNKGKRADGGMEGDECGVSCGSPDQGPEEPRRRPEALDSALNMEPESGRKLRREEGEEPAEEEQRKPQKDKKKKRRKHD

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	Family	Interproscan
PF01585	G-patch	G-patch domain	Family	Interproscan
PF06602	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF21098	PH-GRAM_MTMR6-like	GRAM domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467	Domain	G-patch domain	Interproscan
IPR001509	Domain	NAD-dependent epimerase/dehydratase	Interproscan
IPR010569	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR030564	Family	Myotubularin family	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10807	MYOTUBULARIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004438	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010507	Biological Process	negative regulation of autophagy	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-