Gene detail

Detailed information of KAJ8378244.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8378244.1	G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP	AAFF_1.1_unplaced_326	263736	288489	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00244480

ATGTCGAAGCGGTTACGGAACAGCGAGGTTTGCGCTGATTGTAGCGTTCCAGAGCCTCGCTGGGCCTCGGTGAACAGGGGCGTGCTGATCTGCGACGAGTGCTGCAGCGTCCACCGCAGCCTCGGCCGGCACAGCTCCCAGGTGCGCCACCTGACGCACACGCCCTGGCCTCCCACCCAACTTCAGATGGTCCAGACGTTGTATAACAATGGTGCAAATTCAATATGGGAGCACTCCCTGCTGGATCCTGCCTCCGTATTGAGTGGGAAACGCAAGGCCAACCCGCAGGACAAAGTGCACCCTAACAAAACCGAGTTCATAAAAGCCAAATATCAAATGTTGGCGTTTGTCCACCGGATGCCTTGCCGTGACGACGACAGCTTGACGGCCAAGGACCTGAGCAAGCAACTTCACTCGAGCGTCCGGACTGGTAATCTGGAGACGTGCCTGAGGTTGCTCTCCTTGGGAGCCCAGGCCAACTTCTTCCACCCGgaGAAAGGTAACACCCCCCTGCATGTGGCCGCCAAGGCGGGACAGGTCTCCCAGGCAGAGCTGCTCACCGTCTACGGGGCTGACCCAGGGGCACCTGACACCAGCGGCAAAACTCCTATTGACTATGCAAGGCAAGCTGGGCACCACGACCTCGCTGACAGACTGGTGGAAATTCAGTACGAGCTCACCGATAGGCTAGCGTTCTACCTCTGCGGGAGGAGGCCAGATCATAAAAACGGACAACATTTCATAATCCCACAGATGGCAGACAGCAGTCTGGATTTATCAGAACTGGCCAAAGCTGCTAAGAAAAAACTTCAATCTCTCAGTAATCACTTGTTTGAAGAATTGGCGATGGATGTGTACGATGAAGTGGACAGACGAGAGACTGATGCTGTATGGCTAGCAACTCAGAACCATAGCACCCTGGTAACGGAAACAACAGTTGTGCCTTTCCTTCCTGTCAACCCTGAATATTCATCGACGAGAAACCAGGGGCGACAGAAGCTCGCAAGGTTCAATGCACACGAGTTTGCAACACTTGTTATTGATATTTTAAGCGATGCGAAACGTCGACAACAGGGAAATTCTATCGCGAGCCCAAAAGaaaatgTGGAACTAATCCTGAAGGCAGTTGGCAGTCGGCATGGCAGCGAAGGTCAGGACAATGACCAGCCTGACTACGACAGTGTGGCCTCAGACGAGGATACTGACCAAGACCCGCCCTCCGGCAAGGGAGACCGGACCAAGAGTGTGGATTCGGACTTGTCGGATGGGCCCATCACGGTACAGGAGTTCCTTGAGGTGAAGAATGCTCTGACCGCCTCAGAGGCCAAGATCCAACAGCTCATGAAGGTCAACAGCAACCTGAGCGATGAGCTGCGACTTATGCAGAAAAAGCTGCAATCACTGCAATGCGAGAACTCCTCTCTGAGGCGGCAGGTCACAACCAATATCTGTCAGGTTCCCAGCGGTTCAGACTACTACCCCGACCCCTCCGGCCCCTCTGCCCTGAAGCGCCGACCGTCCGCGCGGGGCAGCCGCCCCATGTCTATGTATGAGACTGGCTCAGGCCTGAAGCCCTATCTCCCCAAGGGAGAGGCCCCCTACCCAGAAGAGGGTATCCCCACCCTGCAGCCCTTCCCGCCTCATATCGGGAGAGGGGCATTTGTGACCACCTCTTCAtcccttccctccttcccttccaCCCTGTCCTGGTCTCGGGACGAGAGCACACAAAGGGCGTCCAAACTGGAAAAGCAGAGCAGCATGCCAGACAGTGACTATGACAACACGACCAATGACGCTGAGCTGGACGATTCGGGCCTGGGTAGGAAGAGCAGGCTGAGGAGCAGCGGCTGGCAGGGGGAGGGCTCTATCCCAGAGCTGGACGACCTGGAGGCAGAGCTGGACCCCACCCTGCCCAGCACCGAGGACGTCATCCGCAAGACGGAGCAGATCACCAAGAACATCCAGGAGCTGCTGCGGGCCGCACAGGAGAACAAGCACGAGAGCTTTATACCGTGCTCAGAAAGGATACATGTGGCTGTGACGGAGATGGCCGCCTTGTTTCCCAAGAAACCGCGGTCAGAGACGGTGCGTGGCTCCCTACGCCTCCTGACGTCCAGCGCCTACCGGCTGCAGTGCGAGTGTAAGAAGGCGGCGCCGGCGGAGAGCGGGCCCGGGCCGGACATGCAGCTGGTCACCCAGCAGGTCATCCAGTGCGCCTACGACATCGCCAAGGCCGCCAAGCAGCTGGTCACCATCACCACCAAAGAGAACAACAACTGA

Transcript

AAFF_T00244480

TGAAGAATACGACTTTTGACGTCCGTGACCCAGAACTCTGACAGGCGGACGTTTTTGTGTCCTGTCTATTAGGCAAAAGACTTAATTCTACGTAAGCTATTTCTACGCAGTGTTTAAGCTGCAGTCTTCACTCCACGCTAGATATATCCCGTACATGTATTTCATGAATAAGAGTTCCGTCCTAAGAACTGCAGCTGCTGGCTTCCCGTCTGTGTTGTAGAATAAAAccgaagaggaaaaaaatactgTTGTCGCTAGCCAATTATTTAGTTGTTCGTTTTTCTCAGTTGGACTTGTATCTGGAGAGTTTCGACACCGCCATTTGCTAGCCGtcatatgaatatataaattgaacaaaacacattttgaccTTTTAAAGGCCTTTTTATCTGGAAAAAGGATGTCGAAGCGGTTACGGAACAGCGAGGTTTGCGCTGATTGTAGCGTTCCAGAGCCTCGCTGGGCCTCGGTGAACAGGGGCGTGCTGATCTGCGACGAGTGCTGCAGCGTCCACCGCAGCCTCGGCCGGCACAGCTCCCAGGTGCGCCACCTGACGCACACGCCCTGGCCTCCCACCCAACTTCAGATGGTCCAGACGTTGTATAACAATGGTGCAAATTCAATATGGGAGCACTCCCTGCTGGATCCTGCCTCCGTATTGAGTGGGAAACGCAAGGCCAACCCGCAGGACAAAGTGCACCCTAACAAAACCGAGTTCATAAAAGCCAAATATCAAATGTTGGCGTTTGTCCACCGGATGCCTTGCCGTGACGACGACAGCTTGACGGCCAAGGACCTGAGCAAGCAACTTCACTCGAGCGTCCGGACTGGTAATCTGGAGACGTGCCTGAGGTTGCTCTCCTTGGGAGCCCAGGCCAACTTCTTCCACCCGgaGAAAGGTAACACCCCCCTGCATGTGGCCGCCAAGGCGGGACAGGTCTCCCAGGCAGAGCTGCTCACCGTCTACGGGGCTGACCCAGGGGCACCTGACACCAGCGGCAAAACTCCTATTGACTATGCAAGGCAAGCTGGGCACCACGACCTCGCTGACAGACTGGTGGAAATTCAGTACGAGCTCACCGATAGGCTAGCGTTCTACCTCTGCGGGAGGAGGCCAGATCATAAAAACGGACAACATTTCATAATCCCACAGATGGCAGACAGCAGTCTGGATTTATCAGAACTGGCCAAAGCTGCTAAGAAAAAACTTCAATCTCTCAGTAATCACTTGTTTGAAGAATTGGCGATGGATGTGTACGATGAAGTGGACAGACGAGAGACTGATGCTGTATGGCTAGCAACTCAGAACCATAGCACCCTGGTAACGGAAACAACAGTTGTGCCTTTCCTTCCTGTCAACCCTGAATATTCATCGACGAGAAACCAGGGGCGACAGAAGCTCGCAAGGTTCAATGCACACGAGTTTGCAACACTTGTTATTGATATTTTAAGCGATGCGAAACGTCGACAACAGGGAAATTCTATCGCGAGCCCAAAAGaaaatgTGGAACTAATCCTGAAGGCAGTTGGCAGTCGGCATGGCAGCGAAGGTCAGGACAATGACCAGCCTGACTACGACAGTGTGGCCTCAGACGAGGATACTGACCAAGACCCGCCCTCCGGCAAGGGAGACCGGACCAAGAGTGTGGATTCGGACTTGTCGGATGGGCCCATCACGGTACAGGAGTTCCTTGAGGTGAAGAATGCTCTGACCGCCTCAGAGGCCAAGATCCAACAGCTCATGAAGGTCAACAGCAACCTGAGCGATGAGCTGCGACTTATGCAGAAAAAGCTGCAATCACTGCAATGCGAGAACTCCTCTCTGAGGCGGCAGGTCACAACCAATATCTGTCAGGTTCCCAGCGGTTCAGACTACTACCCCGACCCCTCCGGCCCCTCTGCCCTGAAGCGCCGACCGTCCGCGCGGGGCAGCCGCCCCATGTCTATGTATGAGACTGGCTCAGGCCTGAAGCCCTATCTCCCCAAGGGAGAGGCCCCCTACCCAGAAGAGGGTATCCCCACCCTGCAGCCCTTCCCGCCTCATATCGGGAGAGGGGCATTTGTGACCACCTCTTCAtcccttccctccttcccttccaCCCTGTCCTGGTCTCGGGACGAGAGCACACAAAGGGCGTCCAAACTGGAAAAGCAGAGCAGCATGCCAGACAGTGACTATGACAACACGACCAATGACGCTGAGCTGGACGATTCGGGCCTGGGTAGGAAGAGCAGGCTGAGGAGCAGCGGCTGGCAGGGGGAGGGCTCTATCCCAGAGCTGGACGACCTGGAGGCAGAGCTGGACCCCACCCTGCCCAGCACCGAGGACGTCATCCGCAAGACGGAGCAGATCACCAAGAACATCCAGGAGCTGCTGCGGGCCGCACAGGAGAACAAGCACGAGAGCTTTATACCGTGCTCAGAAAGGATACATGTGGCTGTGACGGAGATGGCCGCCTTGTTTCCCAAGAAACCGCGGTCAGAGACGGTGCGTGGCTCCCTACGCCTCCTGACGTCCAGCGCCTACCGGCTGCAGTGCGAGTGTAAGAAGGCGGCGCCGGCGGAGAGCGGGCCCGGGCCGGACATGCAGCTGGTCACCCAGCAGGTCATCCAGTGCGCCTACGACATCGCCAAGGCCGCCAAGCAGCTGGTCACCATCACCACCAAAGAGAACAACAACTGACCACGCCCCGACGGGGAGGTCACACGCTGACCGCACAAGGCCCGACAGTTCTGCTAGGTTAACGTGCTATttgccttcttttttttacgttactttttttaatatgtaataattggagacattaacatttttttgacatttttgttttcgttttttctattttatatcagtattattactatttgcatgttatttttttatttaaagaaaaataaagttttaaaaaacaaaaaaaacgttccCTGCAACTATAGCCAAATGCCACGGGACAAAGCCTGCTCTGCAccagtgttaaaaaaaataactacGCGCCGTTTATACATGCGGAAAGTAGGGCAGTGAACGCCGTTTGAGTTTATTTTCAATGGACGCACTTCCACTAAACGCGTGAAAGAACAAGGGGGCGTGGCTACTCGGGACGGGTCGGCAAGCGAAGCGGCAGTCTCCAGAAGAAGGCGCTTAAAAGGGGCCTGACAGGAATTTTCTCGAGAGCGTCGCTCAGGGTGGCGGTTCTTGACAGACCAGTCGTTTTCTCAAGCGATAACTGTGCATTGCACCCAGGCTCCATCCACTTTTCCCCTCACTCTGGAGACCGAATAGCCAGTCGCTGTAACGTTTTCTGTTCCCTTAGTATACGTTTCCATTAGTATAAATAGGCCTTTGGTTGATCATGTGCtttcattcaaaatatatcacACAGCACTCCGTTTGAGCAGaagccctgccccccccaaacaaaatgCCCCGCCCAGCCCAGACATTTTGGTGCCGTGATAGACAAGACTTAGATGGGACCGAAGATTGACTTCTGCAAACTACTTTTAATATCCCAACCCCCCTATAAGCTATAAAACAAGACTGCCCCAGACCACGGGTGACATCTGGAAACTGAGCCGCAACAGTCAGGGACTCGTCCGTGTGGTTGTCTCGTATAGAATGCAATGCTTGTTTCCCCTTCCCGCCCCAAGGCCCAGAAACCAGGCTGAAGCTGCACATCTTCTAGCTGATAACAGTATTTGGTTGAGTTTATTTTTGGCGACTTTGGTGATGTGTTTAAAAACCCCAACAGTTTAGCCGAGATGTTGTGAAACCTAAAGCCATAACTAGTGATGTATTAAAAGTGCTAATATACCTCATGCTTGTGTCATCCTCACCCCGGAAACAACATTcacgaacaaaaaaaactagacctgaaattcatatttttggCTTTTTGCGTGACCACATGGGGACTATATTTAGAGGTGCTTTTGGAAGGCTTCCTTATATTTATCTCTCTGCGTCGTGGGTTAAACTTTAAGGGAGATGCTAAATAAAACTAATGGGAGATTAATTCAAATGCAAACATTTCaaacctcagtgtgtgtgtgtgtgtatgtatgtgtgtttgtttgtcagactttttgttttgtttttattccttcCAGCTTGAACGATCCTGCTACAACAAATGTTGCATCTTCCATTTCAAATGCACTTTCTACTTGTACTTCCTATAGTGGATATGTCAAAACACAAGAAGCCTCATTCAGGATGAGTGGAAAAGCAATTTGTATCCAAATATCCACCAGCAGCCTGTTGTActtgtgttcatgtttgtgtaTTGGTGGTGCTTTTAAGTAGAAAAGCTAATACAGTATACTGGACATGGTGCCATATTCGttgcattttcatttgtatgCTAGAATCGTATTTGTTACTGTTAGTGGCTCGCAGATCTggtaaaaaccttttttctttATGTGTGATTTTTCTCTTTCGTGCTGCTAGGTTTATAATTTATGTGCAACTAATGGGATGTTGGATATCCTTTTTGTTATTCTGCCATCAGAGGGTCTTCAACTGCAAACGGTTCAGAGCTTAGTGTTATACTGTACTTGAAACTCATGATCAAGGAAACGTCCGTCAAGTCTCTGATTCTAAAAGGGGCGTGGTCTTCACACAGGGATCTCAGTCAAGCAGTTGTCATGGCTGCGGTGCAAAActtgccttttattttttaataaacttaATTTATAATTGTAAcctgaaaatgtttgtttttgacctTAATGTACAAACCTGTTGtaagattattttatttgcattcatgtattatattttttgcctgataattatacaataaaccAGGCTTCAAATTAACCACCTACGAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan
PF08518	GIT_SHD	Spa2 homology domain (SHD) of GIT	Family	Interproscan
PF12205	GIT1_C	G protein-coupled receptor kinase-interacting protein 1 C term	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF16559	GIT_CC	GIT coiled-coil Rho guanine nucleotide exchange factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR013724	Domain	GIT, Spa2 homology (SHD) domain	Interproscan
IPR022018	Domain	ARF GTPase-activating protein GIT1, C-terminal	Interproscan
IPR032352	Domain	Arf GTPase-activating protein GIT1/2, coiled-coil domain	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR047161	Family	ARF GTPase-activating protein Git-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46097	G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007420	Biological Process	brain development	Interproscan
GO:0008277	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0032012	Biological Process	regulation of ARF protein signal transduction	Interproscan
GO:0036465	Biological Process	synaptic vesicle recycling	Interproscan
GO:0045202	Cellular Component	synapse	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-