Gene detail

Detailed information of KAJ8378122.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8378122.1	HYPERKINETIC, ISOFORM M	AAFF_1.1_unplaced_331	611764	663030	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00248360

gggagagggagagagagagagagagagtgggacgTGATCGCACTGGTGGCACACATTAACATAGGCAGGCAGAGCCGCGCGTGTTTTTTGGCTCTAAGAGATCTGAGTGAGGAACTACAGAAGGAGGGCGAGAGTGAGttagggagacagagagagacagagagagagcactctGTTGACTACAGAAAAGGCTGTGATATCCCCTGGATGAAATAGAGTTCCGTTCTGCCtcgtgcccccccaccccctgtcctGTGggtctcccccctcctcccccctgcgTCTCTGTTACTTGCGCTCTCTCCAAACGGACCGACTCAGTCCGGGGACCCAGCGAGGCTGCTCCTCCTGGAACCTTTCCAGCCACTCCGGAATCCGCAGGAACATTCCGTCTGCACATCATCACTCACCTCACCCCCCCGCCCTTCCTCGCCGTGTCCTCCActcaagacagacagacacagacagaaggacgcacacagacagacagacagagagaatcGCAGTGAAGCGCTCTCTCCGTCgacaaacaaagaaagaaaacaaaaaagaaagaaagaaagaaaaggactCTTCTCCTTCGCGTCGGTCGAGCTGAGCGGCCGCAGCAGACATGCAGGTCTCCTTCGCCTGCACGGACCACAACCTGAAGGCTCCGCGGAACGGCGATGGGCACGGCAAGCAGAGCGCCACCAGCCCCAACGCGGGCAGCGCGGCGCGGGCACGCTTCCGCACCGTGGCGCTGATCGCCCGCAGCCTGGGCTCCTTCTCCCACAGACACCACATCTCCCTGAAGGAGTCCACCGCCAAGCTGACCGGCATGAAGTATCGGAACCTGGGGAAGTCAGGCCTGCGGGTTTCCTGTTTGGGGCTCGgaaccTGGGTGACATTCGGGGGCCAGATTTCTGATGAGGTGGCAGAGCGGCTGATGACCATCGCCTACGAGAGCGGGGTCAATCTCTTCGACACCGCTGAGGTGTACTCGGCTGGGAAGGCTGAGATCATCTTGGGAAACATCATCAAGAAGAAATGCTGGAGGAGGTCCAGTCTGGTCATCACCACCAAGCTCTACTGGGGGGAAACGGATCAGGGTGGAAGCACATTGATCCACAGCGCTGTCGGTCTTACACAACTCCCACAGTACAGTGTGCAGAGAGCATCGGGGAGggcggagacagagagaggactcTCCAGGAAGCACATTATTGAAGgactgAAGGGCTCCCTCCAGAGGCTGCAGCTGGAATACGTGGACGTCGTCTTCGCCAACCGTCCCGACAACAACACGCCCATGGAGGAGATCGTGAGAGCCATGACCTATGTGATAAACCAGGGCATGTCCATGTACTGGGGAACCTCACGGTGGACAGCTATGGAGATTATGGAGGCGTACTCTGTGGCCCGGCAGTTTAACCTGATCCCCCCGGTGTGTGAGCAGGCCGAGTATCACTTCTTCCAGAGGGACAAGGTCGAGGTGCAGCTGCCCGAACTCTACCACAAAATAGGTGTGGGCGTGGTCTCGTGGTCTCCGCTGGCCTGTGGAATCATCACTGGGAAGTATGAGAACGGCGTCCCAGAATCCTCCAGGGCCTCCATGAAGTCGTACCAGTGGCTGAAGGAGAAGATCGTGAGCGAGGACGGCAGGAAGCAGCAGGCCAAGCTGAAGGAGCTGAGCCACATCGCCGAGAAGCTGAGCTGCACCCTCCCTCAGCTGGCTGTGGcctgGTGTCTGCGGAACGAGGGCGTGAGTTCTGTGCTGCTGGGAACCTCGAACCCGGAACAGCTGACGGAGAACCTGGGCGCTATACAGGTGCTTCCAAAGATGACGTCCGACGTGGTGTCTGACATGGACCACATCCTGGGGAACAAGCCCCACAGCAAGAAGGACGTCCAGTCGTAGACCCTGCCGTCTGTCTGGGGGGCGGTGGATGGAGGGACCCCTCTGTCTTCTCCCCCactgctccccctccctccctcgcccaCCATGTACCGCCACCGCACCCCCTCTACGTCCCTCCGATCCTCCACGTCTACATCACAGAACACCTGCGAAAACCACACAGCTCCTGTGTGACAAATGCATGcctacgggggggggggggggtgtcaaaGCTGCACCATAACCGGGTCATGGGTACAGCACACCAAACTAAGAAACCACCTGACACTGAAAGGACAGGAATAtggaaagggggggaaaaagaaaagccTAATCCAAACAGTGTGTTCTCTGTAACTCTGTAATTACCATGTTATTCCTGATGCATGACCTTCAAGGGTCATGCTGCTagccctgcccctcccctgTGCATCAGTGTGACCTGTGACCCCTGCCTGACCCCTATGGAATGGACTTCATTGTTCGAGAGCGAACGAGAAAGGACTGAGGCTAGTAAACAGGAGTCTGCATGCTTCCCCAAGGATGGAGGTGCAGGTTTGTGattgtttgtctttgtctcCCCCTTAAGCCCAGATAGGGAATTGCAGCACTGTCATTTATGCAGGAAGGGGGATGAGGCCGAATGTGTCTCTCTTGTAGGAAAGACTGTCCTCTCGGTCTGATAGCTGGACCTGCAGCATCAAGCTCTGATGTACAGGCGGAAACTACACggggacaccagaaacaaaatgattatttctacactgaaacacttttttctttctgaaacaaaaatgcatttggTATAGCAAGGGAATTAGACAAAATGGGGATTCATCTGGTAAAATATGCCCGCAAAAATcgaatttatttaaatttaattaaattaattaatttgaaattaaaatgaattaatacagcccaggggcgattctaggattttacttttagggggggctcagcccccaatgagaatgtgagatgtacacatgcaaagcacaagcctaaaattttaattaatttactgttacattccccaaaacaaaaacaccacagtggtggtcgctctcaaaattgaaacaccactctctatctgtggtgtttttaaaaataggtatgaagtaaaaagtgttttttttttagaaaagaatgactaaacattttcagg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00248	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005399	Family	Potassium channel, voltage-dependent, beta subunit, KCNAB-related	Interproscan
IPR005400	Family	Potassium channel, voltage-dependent, beta subunit, KCNAB1	Interproscan
IPR005983	Family	Potassium channel, voltage-dependent, beta subunit, KCNAB	Interproscan
IPR023210	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR036812	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43150	HYPERKINETIC, ISOFORM M	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004033	Molecular Function	aldo-keto reductase (NADPH) activity	Interproscan
GO:0005249	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006813	Biological Process	potassium ion transport	Interproscan
GO:0008076	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0015459	Molecular Function	potassium channel regulator activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0031234	Cellular Component	extrinsic component of cytoplasmic side of plasma membrane	Interproscan
GO:0044224	Cellular Component	juxtaparanode region of axon	Interproscan
GO:0044325	Molecular Function	transmembrane transporter binding	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:1901379	Biological Process	regulation of potassium ion transmembrane transport	Interproscan
GO:1902260	Biological Process	negative regulation of delayed rectifier potassium channel activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-