Gene detail

Detailed information of KAJ8377393.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8377393.1	NEL HOMOLOG	AAFF_1.1_unplaced_355	160994	200456	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00260530

CTGGTCTCCAACCAATGTTgactatatatatttgaattgaGGTGTACAGTAATGTTTTATAACATCCTTTCATTGGGGAAACACTTGCTAGATTAGGATTAGCTGGGGTAATGGTGTGTGCCTGTGCCCTGGGAACCGTTATCTTAATGTCCACTGCTGTGGGAGTAATTAAAGTGTTTAGTTCTTCGGCGCACGAGACGCTAATTGACTGCACCTGATGAAGTTGGCACGGACGCTCGTGGGGTTCTGGCGCTGCAGTTCACTGTTGAGTCGGTAATGCAGTGGCGTAGCTGTACAGCCGtatttttaagacattttttacaggataaaatacaaaaaaaggcaCGTTTCttcgtagttttttttttagtgtGGGCATTCTTAGCGGAGCACCACGTGTGCAGAACGCGTATTAATGCGTCCGACCAGAGGTTAAATCATGTATTTCAGGATGTCTTTTAGTGAATGCGGTGCCAGTTAATGAGAGTATTCCGAAGCGCCCacgtttgtattttgtgctAGCTTTCCATAACTTTACAAGCACTGAAAGAAACTTGATTAAGACACCAGTTCCGATGCCGCTTTGAACAGAATTTACCGCAGAAGCCCAAacagcggggggggggcggggctgggctgggctcgcGCTGGTCCTCACGCCCCTCCCCCTTTTAATCCCCTCGGAAGAAACGCTCGCGCTGCGCGCGCGTGCCCGCATTTCACATCCAGGAACGCCGCGCGCGGGTTTACCTCCGCTCAGTGCACCATTGTCTTTCGCATAGAGGAACGGATTGCCATCTTCTTctaattcttcttcttctgagcTGCCCTGAATGGAATATTTTTCTGCATCTCTTGTCTTCTTCTTTCGCTTTTGTGTTTAAAGTTCCGACGATGCTGTGTCCGTTATTTGGGGTCGTGTAGTGCTGCtgcactcgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgattgactCGCGCGCGGTAGGATTCGTTTTGCAGTACAGCCGCTTTTTTGAAAGTGGACAGGAAAACATGGActaatttgtttttctttcacgATGGGATTATTACGActttcctttgttttctgtATATTTTGCGTCTTTTCAGTTTTAGGGTTCGGGGTCGACCCCGCTTTGCGCATTAACGTTTTCAATGAACTGAAGCTCGGTGAGTCTTTTGCTGGAGTTTCCCAAGTCCAGGGCTTCCACAACGAGAGCAGAGCGTTTCTATTCCAAGacgTGTTGAGGAGTGTGAAGGCTCCCAGCGATGTGGCTGAACGCATGCTGGCGAAGTTGCGGCGCAGGAGCGAGTTCACCCTGCTGGCCACCCTGAAACAGGAGCAGCTCAACTCCGGCGTCATCCTGTCCATCCATCACGCCGACCAGAGGTTCCTGGAGCTGGAGAGCAGCGGGCAGCGTAACGAGATCCGGCTGCACTTCCGCACCaggggccagcagcagcacagtgAGGTCTTCCCCTACACGCTAGCTGACAACCAGTGGCACAAGCTGTCGGTGGCCGTCAGCGCCTCCCATGTCCTGCTGCACGTTGACTGCAACAGGATCTATGAGCGAGTGGTGGAGACGCCCCTCATGGACATCCCTGCAGAGACGTCCTTCTGGCTGGGGCAGAGGAACAGCGCTCACGGCTTCTTCAAGGGGATAATGCAGGATGTCCATCTGCTCGTCATGCCCCAAGGGTACATCTCTCAGTGCCCAGACCTCAACCGCACTTGCCCCACTTGCAATGACTTCCACGGTCTGGTGCAGAAGATTATGGAGCTGCAGGACATCTTGGCCAAAACATCCAGCAAGCTGTCCCAGGCGGAGGAGAAGATGAATGGACTCGATGGCTGCTATTGTGAGAGGACGTGCAGCATGAAGGGGGTGCTGTACCGGGAGGACCAGGCCTGGACAGATGGCTGCAGGAACTGCACTTGCACGAATGGTACGGTCCAGTGTGAGGGCGTggtgtgcccccctccccagtgCCCCCGGGACTCCACCCCCGCCTACGTGAGTGGAGCGTGCTGCAAAGAGTGCCAACCTGCGTGTTTGTTTCGAGAGCGGGAGTACGTGGAGGGGGAGAAGAAAGCCGTCCGAGACGACTCGGGAAAGTGTTCACTGTTTGAATGCAGGGACAGGACCATGCGTCGGGTGGTGGAGACGCCCTGTCCGGAGCTGAACTGTCCCGAATCGGAGCAGATTGCCCTCACTGACCGGTGCTGCAAAGTGTGCAGAGGCCATGACTTCTGTGCCGAGGGCCACCCCTGTGTGGAACACTCTGACTGCATCAACCTGGAGGCCGGAGCCTGCTGCAGCTGCAAGGACGGCTTCCGGGCGCTCCGCGACGACAGCGCCTACTGCCAAGCTCAGCCCATACAGCAGCCTGCCTTTACCACTGAATTAGAGGAGTCCATTATGGAGAAGTGGGGAGACGGCCTGCGCTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093	VWC	von Willebrand factor type C domain	Domain	Interproscan
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR001791	Domain	Laminin G domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR048287	Domain	Thrombospondin-like, N-terminal domain	Interproscan
IPR051586	Family	Protein kinase C-binding NELL	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24042	NEL HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005080	Molecular Function	protein kinase C binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008201	Molecular Function	heparin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-