Gene detail

Detailed information of KAJ8362422.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8362422.1	CALPAIN	AAFF_1.1_unplaced_670	15766	52114	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00375700

ATGATGGCTGATTGCGTGGAGCTGGAGAAAATTGGCGGAGTGGAGATGGAGCGTGAGCGCTCTGGAAGAGGAATTTCCGAGGAGGGAACGTCCACACTTCGAGATTTAATTTGTGAGATCCTCAATTCGATGACACGTCTAAGGACAGAGCTGAATTTAGGTGAGACTGTTTTAAAAATTGATGCAAACCCGACCAACATCAGCGTGTCAACTCTTCAGCCAACGGACGCACTTACCTACCTGCAGAATCATATCTCCACCCTACAGTCGGTATCTGCGAGCCTGAAACTGCTGACAAAGGCGGACGCAGGTGAGGTGCAGAAGAGTGACACTGATGCAGGTGCTGTGCGGCCAGTGGAGATGGAGGCTGTCCCTGCGTCTTCACAGCCTGAGGAGGCCACCGTACAGATCCGAGCCAGCAAGTCAGAGatTGACAGAAGAATATCAGCGTTTATTGAGCGCAAACAGCTGGAGATCAATGAAAACAACGTGAGGGAGTTTTGCAATGTAATCCACTGCAATCAGGAAAATAGCTGTGCCAGAACGGATGCTATCTTTACACCTTTCCCTGGGTTCAAGAGCCACATTAAAGTGACGAGGGTGGTGAACCGGTACGGGCCTCAGACGTGGGTAGGGGGGCACAGGCAGATCTCCGGGCTGAAGCACAGCATCGCCCTGTGTGGAAACCCAGCCGTTGAGGAGCGACTACAAAACATTGAAGCACATCTGAAGCTCACTGCAGACAGACCCGTGCCCCAGAACATTTACGAGAGGCTGAAGTGCATGGAGGACCGCATTCTGGAGCTGGAGGGTCTCTCCCCCGAGTACTTCCAGTCCACAGGTCATCTGCACAAGAGGTCAAAAGCGACGCCTTCACAGgctTACAGCCTGTCAGAGCTGGATAGGAAGATCAACGCACTCAAGGCCTCTCTCCTTAAGAAAAGGGATCGGAGGAGGTGGGAGGTGAAAGGTGGCGCTGAGAGAACAGAGGAGAGGAAATGCTACAGTGAGAATGAAGGAGAGGAGGTGAAGGAGGTGAAGGAGGTGACGGCGATAAGCAGCAgcggacagccaatcgccaccctgAATGGGgatcctggccagagccgggctggcgcagccagggatctaaccccacccgaggcccctggaCAAATTACTAATACTGGTGCAagtgatgggcgtatcaggGGGAACACCTGTCTGGAGAATGGCTCATACCTCATTAACTACGTAGGCTGTGCCAAGTGCCATCAGAGGGACTTTGTGCTGATCAGCAACAAAACCACCGAAGAAGAGGATGGAGAAGAGCTCGTCACTTATGACCACTTATGCAAAAACTGTGACCATACCATAGCAAGGCACGAGTACACCTTCTCTGTGGTGGACGATTATCAGACATGCAGATGTGTATGCGCCATGATGGAGGTGGAAGAATATGTCGTGAAAACGGAAGAGCAGGAGAAGGAGAACATGCCTTTACCCATGGGAGCCTCTCCCATGCCGCCGGGAAATATCGGCCTTCCCAGCGCCGCGCCCGGTGGCATCTATGCGGCCATTTTGAATCGTAACCATAAAGTCCTTGATGCCAAGCGTCTGAAGAACTTCCTTGAGCTGAGAGATAAATACTTTGGCAAAAAGGTgctgtttgaggaccccctgtTTCCTGCGGACGACTCCTCTCTGTTCTATAGCCGCACGTTCCCCATCAAATTCGAGTGGAAACGGCCACCCGAGATCTGTGAAAACCCCCAGTTCATTGTGGGAGGAGCCAAACGGACAGACATCTGTCAGGGTGACCTGGGTGTggccgagtgtgtgtgtgttggcgggGAGCAGTACAGACGTATCCCCAACAGCCTGGGGGAGCAGTACAGACCTATCACTGACAGCCTGGGGGAGCAGCCTAGCAAGGAAGCCAGCCATGGGGGTGTGCAGCCACCCAGGGACAGTGATTGTTGGTTGCTGGCTGCCATTGCCTGCCTGACTATGAATGAGAAGCTGCTTTACAGAGTCATTCCACCAGACCAGAGCTTCACAGAGAACTATGCAGGAATTTTCCACTTCCAGTTCTGGCGCTATGGCACCTGGGTGGATGTTGTCATTGACGACCGCATCCCCACATACAACAACCAGCTGGTTTTCACCAAATCAGCCAAGAGAAATGAGTTCTGGAGTGCTTTGCTGGAGAAGGCCTATGCCAAGCTGCACGGCTCCTATGAGGCCTTGAAGGGAGGGAATACCACAGAGGCCATGGAGGACTTCACCGGAGGCTTGACCGAGTTCTACGAGATAAAGGAAGCGCCAAAAGAGCTCTACTTCACCATGAAGAAAGCGCTGGAGAGGGGATCTCTCATGGGCTGCTCTATTGATGTGCTCATTCCAACCCGGTTAGAAAACAGAACTCCCTCTGGACTTGTCAAAGGCCATGCCTACTCTGTCACTGGAGTGGCGGAGACCGACTACAAGAAGACTAAGCTGCGTCTTGTGCGCCTGAGGAACCCCTGGGGCAAGGTGGAGTGGAACGGGCCATGGAGTGACAACTCCAAGGAATGGGggtctctctcccgctctgaGAAGCAGAGACTGCAGCTCCAGAACACTGAGGAGGGAGACTTCTGGATGTCTTATGATGACTTTAAAAAGAACTTCACTAAAATGGAGATCTGCAACCTCACCCCTGATGCTCTGGAGGACGATAAGGCCCACACGTGGACAGTGTCTGTGAACGAGGGGCTGGGTACGAGGCTGCTCCGCAGGGGGCTGCCTACCGGCTGCGTCTGCTGGAGGAGGACGACGATCCCCGAGGATGCAGAGGTGGCCTGCACTTTCGTCGTGGCTCTGATGCAGAAGAATCGCAGAAAAGAACGCAAGACGGGCGCCAGCCTCTTCACCATTGGGTTCACTATTTATGAGGTGCCCCACCGTTACCAACGCCGGAGACTTAATGTTCCAAAGGAGATGCAAGGCGACCAGCAGCACTTGCCGAAGGACCACTTCCTGTATAATGCATCCGTGGCCCGATGCAAGTCCTTCATCAACATGCGCGAGGTTTGTCAGCGGTTTCGTCTGAGCCCGGGAGAGTACGTCATCATTCCCTCCACCTACGAGCCCCACAAGGAGGGAGAGTTCATCCTGAGGGTCTTCTCTGACAAGAGGAACACATCCGAAGGGATACAGCACAAGATCGAAGCTGACCAGCAGGTGAacgaaaataaaaaagggaagaaagaaAAGcccaTTGTGTTTGTGTCGGACAGAGCAAAAGCCAATAAGGAGATAGAGCTTGAAGAGTATGAGAAGCAGATAACCAATGGGAAAAAGCCGGCATCCACAAAGCAGGAAAGTGAGGAGGAGAAGCTGTTCCGGTCCATCTTCCAGCAGATCGCTGGAGAGGACATGGAGATCTCAGCCAATGAACTGAAGGGTGTCCTTAAAAGGGTGGTGGCAAAATATAAAGAATATAAGTCAGAGGGTTTCAGTCTGGAGAGCTGCAGAAGTATGATAGCCCTAATGGATACAGATGGGTCGGGAAAATTGAACCTGCAGGAGTTCAATCACCTGTGGGGCAAAATCAAACGTTGGCAGGGGATTTTTAAGGACTATGATAAGGACCAGTCTGCCACCATCAACAGCTATGAGATGAGGAACGCTGTCAATGACGCAGGCTTCCGTCTCAACAACCAGCTGTATGACATCATAACTATGCGATACGCAGATGAGAAAATGAACATTGACTTCGACAGTTTTATCTGCTGCCTGGTGCGACTTGAGGGCATGTTTCGGGCATTCAACGCCTTTGATAAAGATGGAGATGGCTTCATCAAACTCAGTGTCCTGGAGTGGCTCCAGCTGACTATATATGCCTGA

Transcript

AAFF_T00375700

ATTACAAAACAGGTTTTACGATTCCAGGTAATGTGTATATTTAAAGCAACACCTTAAAAGTAGTCTGGTTAACAAAATTAGCTAATAGAATTTGGCATAGCCTACCATCTACACTCAGTACGTACAGTAGGGGGCGATATTGCGCCTTTGAGTTGTATTGCAGGACACCATTAAACATCGAtcaagaagcagaagaagcacTCGCCACTAAGCATGATGGCTGATTGCGTGGAGCTGGAGAAAATTGGCGGAGTGGAGATGGAGCGTGAGCGCTCTGGAAGAGGAATTTCCGAGGAGGGAACGTCCACACTTCGAGATTTAATTTGTGAGATCCTCAATTCGATGACACGTCTAAGGACAGAGCTGAATTTAGGTGAGACTGTTTTAAAAATTGATGCAAACCCGACCAACATCAGCGTGTCAACTCTTCAGCCAACGGACGCACTTACCTACCTGCAGAATCATATCTCCACCCTACAGTCGGTATCTGCGAGCCTGAAACTGCTGACAAAGGCGGACGCAGGTGAGGTGCAGAAGAGTGACACTGATGCAGGTGCTGTGCGGCCAGTGGAGATGGAGGCTGTCCCTGCGTCTTCACAGCCTGAGGAGGCCACCGTACAGATCCGAGCCAGCAAGTCAGAGatTGACAGAAGAATATCAGCGTTTATTGAGCGCAAACAGCTGGAGATCAATGAAAACAACGTGAGGGAGTTTTGCAATGTAATCCACTGCAATCAGGAAAATAGCTGTGCCAGAACGGATGCTATCTTTACACCTTTCCCTGGGTTCAAGAGCCACATTAAAGTGACGAGGGTGGTGAACCGGTACGGGCCTCAGACGTGGGTAGGGGGGCACAGGCAGATCTCCGGGCTGAAGCACAGCATCGCCCTGTGTGGAAACCCAGCCGTTGAGGAGCGACTACAAAACATTGAAGCACATCTGAAGCTCACTGCAGACAGACCCGTGCCCCAGAACATTTACGAGAGGCTGAAGTGCATGGAGGACCGCATTCTGGAGCTGGAGGGTCTCTCCCCCGAGTACTTCCAGTCCACAGGTCATCTGCACAAGAGGTCAAAAGCGACGCCTTCACAGgctTACAGCCTGTCAGAGCTGGATAGGAAGATCAACGCACTCAAGGCCTCTCTCCTTAAGAAAAGGGATCGGAGGAGGTGGGAGGTGAAAGGTGGCGCTGAGAGAACAGAGGAGAGGAAATGCTACAGTGAGAATGAAGGAGAGGAGGTGAAGGAGGTGAAGGAGGTGACGGCGATAAGCAGCAgcggacagccaatcgccaccctgAATGGGgatcctggccagagccgggctggcgcagccagggatctaaccccacccgaggcccctggaCAAATTACTAATACTGGTGCAagtgatgggcgtatcaggGGGAACACCTGTCTGGAGAATGGCTCATACCTCATTAACTACGTAGGCTGTGCCAAGTGCCATCAGAGGGACTTTGTGCTGATCAGCAACAAAACCACCGAAGAAGAGGATGGAGAAGAGCTCGTCACTTATGACCACTTATGCAAAAACTGTGACCATACCATAGCAAGGCACGAGTACACCTTCTCTGTGGTGGACGATTATCAGACATGCAGATGTGTATGCGCCATGATGGAGGTGGAAGAATATGTCGTGAAAACGGAAGAGCAGGAGAAGGAGAACATGCCTTTACCCATGGGAGCCTCTCCCATGCCGCCGGGAAATATCGGCCTTCCCAGCGCCGCGCCCGGTGGCATCTATGCGGCCATTTTGAATCGTAACCATAAAGTCCTTGATGCCAAGCGTCTGAAGAACTTCCTTGAGCTGAGAGATAAATACTTTGGCAAAAAGGTgctgtttgaggaccccctgtTTCCTGCGGACGACTCCTCTCTGTTCTATAGCCGCACGTTCCCCATCAAATTCGAGTGGAAACGGCCACCCGAGATCTGTGAAAACCCCCAGTTCATTGTGGGAGGAGCCAAACGGACAGACATCTGTCAGGGTGACCTGGGTGTggccgagtgtgtgtgtgttggcgggGAGCAGTACAGACGTATCCCCAACAGCCTGGGGGAGCAGTACAGACCTATCACTGACAGCCTGGGGGAGCAGCCTAGCAAGGAAGCCAGCCATGGGGGTGTGCAGCCACCCAGGGACAGTGATTGTTGGTTGCTGGCTGCCATTGCCTGCCTGACTATGAATGAGAAGCTGCTTTACAGAGTCATTCCACCAGACCAGAGCTTCACAGAGAACTATGCAGGAATTTTCCACTTCCAGTTCTGGCGCTATGGCACCTGGGTGGATGTTGTCATTGACGACCGCATCCCCACATACAACAACCAGCTGGTTTTCACCAAATCAGCCAAGAGAAATGAGTTCTGGAGTGCTTTGCTGGAGAAGGCCTATGCCAAGCTGCACGGCTCCTATGAGGCCTTGAAGGGAGGGAATACCACAGAGGCCATGGAGGACTTCACCGGAGGCTTGACCGAGTTCTACGAGATAAAGGAAGCGCCAAAAGAGCTCTACTTCACCATGAAGAAAGCGCTGGAGAGGGGATCTCTCATGGGCTGCTCTATTGATGTGCTCATTCCAACCCGGTTAGAAAACAGAACTCCCTCTGGACTTGTCAAAGGCCATGCCTACTCTGTCACTGGAGTGGCGGAGACCGACTACAAGAAGACTAAGCTGCGTCTTGTGCGCCTGAGGAACCCCTGGGGCAAGGTGGAGTGGAACGGGCCATGGAGTGACAACTCCAAGGAATGGGggtctctctcccgctctgaGAAGCAGAGACTGCAGCTCCAGAACACTGAGGAGGGAGACTTCTGGATGTCTTATGATGACTTTAAAAAGAACTTCACTAAAATGGAGATCTGCAACCTCACCCCTGATGCTCTGGAGGACGATAAGGCCCACACGTGGACAGTGTCTGTGAACGAGGGGCTGGGTACGAGGCTGCTCCGCAGGGGGCTGCCTACCGGCTGCGTCTGCTGGAGGAGGACGACGATCCCCGAGGATGCAGAGGTGGCCTGCACTTTCGTCGTGGCTCTGATGCAGAAGAATCGCAGAAAAGAACGCAAGACGGGCGCCAGCCTCTTCACCATTGGGTTCACTATTTATGAGGTGCCCCACCGTTACCAACGCCGGAGACTTAATGTTCCAAAGGAGATGCAAGGCGACCAGCAGCACTTGCCGAAGGACCACTTCCTGTATAATGCATCCGTGGCCCGATGCAAGTCCTTCATCAACATGCGCGAGGTTTGTCAGCGGTTTCGTCTGAGCCCGGGAGAGTACGTCATCATTCCCTCCACCTACGAGCCCCACAAGGAGGGAGAGTTCATCCTGAGGGTCTTCTCTGACAAGAGGAACACATCCGAAGGGATACAGCACAAGATCGAAGCTGACCAGCAGGTGAacgaaaataaaaaagggaagaaagaaAAGcccaTTGTGTTTGTGTCGGACAGAGCAAAAGCCAATAAGGAGATAGAGCTTGAAGAGTATGAGAAGCAGATAACCAATGGGAAAAAGCCGGCATCCACAAAGCAGGAAAGTGAGGAGGAGAAGCTGTTCCGGTCCATCTTCCAGCAGATCGCTGGAGAGGACATGGAGATCTCAGCCAATGAACTGAAGGGTGTCCTTAAAAGGGTGGTGGCAAAATATAAAGAATATAAGTCAGAGGGTTTCAGTCTGGAGAGCTGCAGAAGTATGATAGCCCTAATGGATACAGATGGGTCGGGAAAATTGAACCTGCAGGAGTTCAATCACCTGTGGGGCAAAATCAAACGTTGGCAGGGGATTTTTAAGGACTATGATAAGGACCAGTCTGCCACCATCAACAGCTATGAGATGAGGAACGCTGTCAATGACGCAGGCTTCCGTCTCAACAACCAGCTGTATGACATCATAACTATGCGATACGCAGATGAGAAAATGAACATTGACTTCGACAGTTTTATCTGCTGCCTGGTGCGACTTGAGGGCATGTTTCGGGCATTCAACGCCTTTGATAAAGATGGAGATGGCTTCATCAAACTCAGTGTCCTGGAGTGGCTCCAGCTGACTATATATGCCTGAGGCCCGCCACAACCCCCCTTTCTGTTCGATGCCACCGGCGTCTGGATTACCCTGCATATATGGTGTTCATGTCATTTTTCAATAATAAAGGTCTGTTTTCGTTGCCTGTTTGCGAACAAAAAATACTTCTGTCAATTACAGTGAACAAAACAATTTCAAGAAATGATAGTAAATGTCTGTGTCGCGATACAAAGACTAGTAACGCCTAGACCTCTCTTGTGCTTAAGGGTAGGGTCCATCAGGTCTTCTCGAGGGTCGGCTTCATCTCTGCCACCGCCCTGCTGTTATGTCCTCACAGGCTTTGTCTGTGGCCTGCAGAATGGGCAGCTTGCCCATATGGGAGGCGATCGTATACTCTCCACCTTCCGCCCTAAACAAAATccgcatttacatttacattttaggcatttagcagacgctcttatccagagcgacttacacagtttacatttctttacatgcaatcattTTATCcagttggatttttttttactgaagcaattcaggctaagtaccttgctcaagggtacaacggcagtgccccacctgggatttgaacctgcaacctctgagttacaagcccagttccctaaccattatactacactgctgccaatCCGCCGTTGTGGTTGAAGCACGGGGGAATACagagagtgccaccgggggcggcgattggctgtccgccccagggaggggggagggaaaccaacaggaagttcgctgcgcacaggagtggctctgtagtaccggagttatggtcgacagcctggtgagtgctgtctctgAGGAggtgatacttcgcctttgtcactgccggtcacagggctacgacagcgaactcacaatacgagggggggattggcatgaaaaatagagggtgtaattggctactaaattgggagaaaatctgaaacaaattcttaaaataaaataaacactgaatggAGGTGTGGATGTGCTGCAATACAGTGAAACACTGCCTCAGCGTGTTGCTCATTTACACTGTCCTACACCAGGAGACATGAGATGCATGTTTGTGATTATGCAGTGTATCCAGGAAGGTGCATAATTATACAAACGTAGTTATGAAGTAACTGTATGctcattttattgtgttttattttgtttatttatttacaaatgacaTAGCAAAGGCATtgttataatgtaaaaaaataaaaacaagcatc

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00648	Peptidase_C2	Calpain family cysteine protease	Family	Interproscan
PF01067	Calpain_III	Calpain large subunit, domain III	Domain	Interproscan
PF06573	Churchill	Churchill protein	Family	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF16648	Calpain_u2	Unstructured region on Calpain-3	Disordered	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001300	Domain	Peptidase C2, calpain, catalytic domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR009508	Family	Transcription activator, Churchill	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR022682	Domain	Peptidase C2, calpain, large subunit, domain III	Interproscan
IPR022683	Domain	Peptidase C2, calpain, domain III	Interproscan
IPR022684	Family	Peptidase C2, calpain family	Interproscan
IPR029531	Domain	Calpain-3, penta-EF-hand	Interproscan
IPR033883	Domain	Calpain subdomain III	Interproscan
IPR036213	Homologous_superfamily	Calpain large subunit, domain III superfamily	Interproscan
IPR038543	Homologous_superfamily	Churchill superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR050420	Family	Calpain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10183	CALPAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004198	Molecular Function	calcium-dependent cysteine-type endopeptidase activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0043066	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-