Gene detail

Detailed information of Hgig_25006 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_25006	DALRD3 PROTEIN	Chromosome27	263012188	263038255	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Hgig_25006

GCAATAGCATCCAATTATATATTTGAAGCATCATGGTGAATTTAGAGTTGGTTTACTCAAAAGAGACATTTGCCAAATCATTTCTTGAAGCATTCCGGAAGGATGATAATGACTGCTCATCAGATGAGAACTGTGCTTTGCTTCTTCCCTTCATAAAAGCAGTATCTAAATCTCTTCAGAAAAATGGCCACCTCACCATTGCACTTCTCGTCCTTGCAAAATGCAGATCGCTGCCAGATCCTTTTCTTAACAGTGTTGAAGTTCTTCGGCATAAAGATCCTAACCACTACCTTAAGTTGGTACACCACATCCAGGATATATCAAATTCAACCATCTATCCTATTTCAAAAATTGAAACAGATTCTGAACGTGCAGTTCTAAACATATGGCTGCAACAAGATCCAGTCTCGAAGCTTGTTATCATGCGAGCAATTGCTGCACCAAGTGCTGCTGCTGTTGTTGCAAGAAACTATGATGCTGCCACTGCAGCAGTTACCAGAGATGGCAGTGCTGCTGCTACACTATCTGAAAAAGATACGGTGGAGAGGACTAAATCGGAACTGCTACAATTGAAGAATCTAAGTCGGTGCTACGGTGCTAATAGAATACTTAACAATATGAGAATATGCGTTCGTACAAGTGCAGCACCTGACTGGATTAATGATGACAAACCAGCCACAGATGTAACCGTTTACCGCAGCACAGTAATTGCACAGCAAATAGCTGCACTTATTGCAATGTGTGGCGGGTACGTTAGTACCTGCATGACACCTCAACAGCAGCAGACACCATCAACAGCTATGAAGAACATAGATACTCAGCAAAAAGACAGTGACAAGACAATGGAGGTAAATATGAAGCAGAGAGACGTTGCATCTAAAGCATCGACAGAGGTAGAGGGAGATGTGCAAGGAGAAGAGACGGCAGAATCTGTGTCGATGATGGAGGAAGATGATCCGCGGCAGAAACAAAGCCAGAAACGCAGCATTCAGTCGCCTGAAGTGGCAGAGGAAGCTTGTTTGCAAGATAAGGAGAATCCACCAAAAAGAATCAAATCAGTTTCTGTTCAGAGCATCGGTAAATGCTCGTGCTGGAACTCTGACACTGACAAGTCTTCTGATGGCAGAATGATTGCTGAGGGCGCCTCTTTAACTGACGATGGGACGTCTCACTATGAGCTTGTGGTTAGCAGCTCTGGTCATAGTCGCCCTCCTCTTGGTGTTGTTGATGTTGGTCCCGTGGTAGCGGCACATGACAAGAAGAAATTAAGAAAAGAGAATACTGCTCATTGTTGGAAGATTCTGGAGAAGGAAATGAGGACTGCGAGTGCCCACAAGCAGGCAGTGGAGGGGGAAGGATGGGACAGGGAGCTGTCACGGAGAGCCTGGTCCTGCTTCAGAATTCAGTTGCTATCTGCTCTTGCTTCTACACCTCTCCCTCTGCATATAGACCACAAGAATATCAACACTAGAAATGCTTCGTTCCAATTGTACAACTACTCCCGTATTTGTGTGCTGCTGTCCAAGTTTAATGGTATGGTTGAATCAGGACTCGTCCCTCCAATGCCTGCCGCGGAAGACCTGTCCTACGAAACATTGCAACACTTGGAAGAATGGGAGCTTGTCTGGGTCTTTATTGAACAGTGGCCTGAAGTCGTAGCTAATCTTGCTGTTGAAATCAAAGATTCAGTGGCGCAATGCGAGCATGAGAGTGCTGGCCCGAGCAGTGATGAGCAGCAGCCTCCTCCTGCTACAGCTAAAGAGAGTGGCAAGCGCCGTGGGTTTTCATGCCACGCTGTAACACAATTCCTGCACGATTTAACGCGCCTCTGGAGTTCTTACTACAATCGAGTTCAAATCTTAAAATCTCTCGGTGCCAGCGTGCCTGTACCTACTCACCAGTTGCCTGAACTCTATGCTAGAGTCATGCTCGTTAAGGCTCTCAGGAATACGATGGATTCTGCCTTTGCGTTACTTGGAGTTACGCCTCCAAGGCAGATGTAATTTTTAATGTTTAGTTAAGATTCCATTATTTATACAAAATCTACACCCGTAACTCCTTAAACTGATGAATTTTTAAATATATGTTTTAAATATTGAGTTGGGTTTCCAAGGATAATACGAAATCCAGGAAGCCCTCTCAAATAGTCATCAAATTTGAAGGTAAATACTTGTTTGAAATTTCGTGACAGGGAACACAAATTTTGTTACAGTTGCATGTAAATGTTAAGCAACGGTCATTTTTGATTACACCTCAGGCGAATTTGGTATTTGCCCGAGATGAAATCGAAAAGGAAAACAATTGCCGATATATTTGCGAGCAAATGTATATTTTCTAAATAAATGTACAGTTTTAATGAACGTTCTATGTTTACGCAGCCTATATTAGAAAAAAAAAATCTTTTGTTGATGTTTTTGTATCGCGCTACCGCTTCCTGAATTCCGATGTGATTCCGGATCGTGTCAGCGAGACGTAACTTTTTTCAGCAGGTGTTTTCAAGGAAGATTTTTTTTACAGATTCTCGATTTAAATTGTTAATTTTTCTTTTACGTACTTTCACAAATATTCATTACAATATTTAATCGTCATACAAATGCTGGGGCTTCCCGCATCAGTATATCATGTGCACCATTAACCTTAACCTTAGAGAAAAGGTCAGACAAGTAAGATTCTGTTCCTATGAAATAAATTGACTATATTCTGGTGTTTATCAAGATTTAAAACCACCAATTTTTTTTGTATAATTGAGCCCGTATGACAAATGTAAATGCTTAAAATTAACTGTGAATTAAATTGATGTGATTACTGTGCAGTTCGATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05746	DALR_1	DALR anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008909	Domain	DALR anticodon binding	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR037380	Family	DALR anticodon-binding domain-containing protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16043	DALRD3 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004814	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006420	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0106217	Biological Process	tRNA C3-cytosine methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-