Gene detail

Detailed information of Hgig_18898 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_18898	BTB DOMAIN TRANSCRIPTION FACTOR	Chromosome19	340066193	340135956	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_18898

ATGGAGAGCCAGGATGTGGGGAGAGGCAGCGGCAGCATGCTGTGCCTCAAGTGGAACAGGCATGCTGACATGCTGAACAGCATGAACCAGCTCAGATTAAAGGGTCAGTTCTGCGACATGCAGCTAGCGTGTGAGAAGGAGTTGCTGCCAGCGCACCGCCTCGTGCTGGCATCATGCAGTGATTACTTCGCCATGATGCTACAGGAGACGCCCTGCGACAGCCTCGTTGTTGTGCTTAACAACGTCAGTGCCAGGGTCGTGCACTTCCTCCTCGAGTTCATGTACCTGGGGCAGGTTCAGGTACCGGAAAGTGAGCTACCGGTGCTACTGTCAACAGCAGAGGCGCTCAAGATCAAGGGTCTCATACACAACACAGACGAGTACAACTCCTTGCCAGGAGTAATGAATAGTCAAGTCTGTCCAGACAAGAGCAGATGCACGAAGAGTGTGGTGCAGCAACCAACACCCGCCACTTCGCATGTGCGCTGCAGCAGCCCAACAGCACCAGTGTCTCCTCCTCCTACCAGATCAACAAACAGCAGGAGCTGGCAGCAAACAACCGGCGGCTCTTCTTCGTCACCTGGAGCAGCAAAAGAGAGGCTACCACCACAACACCCAGCTGCGCTGCAGAAGAGAAGAGTTCTACAGCAGCCTACGCAGGGATTACCGCCACAGTATCCTCTGCCTCCTCGTGAGACCCAGAAAAGGTCTTCTCCTACTCCTATAAATGCTGCTAGTTGTACAAATGCCACCGCTGCTGGTGGTGGTGTCGGTGGTGCTTTGTCTCTGAGACGGTCTCCATCGCCATATAGCAGAAGCTACCCCGTCTCTACTCAAGTGCTAAATTCGTTCATCACCTCCCTAGCAAACAGCAATAATTCTAACGGCAGCATCAGCGGCGTGAACAGTTCACCATCAACCAGCAGCACTAATGCAAAAATCGGAGCTGGAAACACTTTGATTCAAGGAACTAGTAGACCCAGCACGAGCAGAGGAGCTTCACTTAATTCAGATGGAGCTCACAAGAGAAGAAGATCACCTGACAGCCATAGGAATGATAACAGAAACGCAGCTAAATCTGTAAAGTGTGAGGTAGTGAAAACAGAAGAACACGAATTAGAACAGCCTACCCTGATTATTGATGATAGCGAATGGTCTAGCAATAACAACAATAATAGCAGTCAGTTCTTGGAGTACCGTCCTGATGACGTCAGTAGTGAAGAGGATGAATATGAGGATGTTGTAGTTGGTGCAGGTCAGAAGCACAGAGGCATTAATACCTTAGAGTTGTTACAAGCCTCTAATGTGCAAGGTCCTCCTCGGTCAATCTCTCTCACTGGACCGAGCGGGCCGCCATCCAGACACACCTTCAACAGAACTGCGCTGGAGTCACTGAGAGATGCAGCAGCAGTTGGGTTAGGTTTGAGTAACCACTCTGGCTCACCAAGGTTCCCAACCAACCAGGCACTGGGTGTTATTGCTCCTCAATTCTTGACGCGTCCTCCTCACATGTTCACTGGAGGTAACTTCTCTCAGTTGGTATCCAGTGGTGCTGCTGGTCCTGCTCATCCACCATGGAATAGAGCACCATTATTGCACCCTCCACTTGGTGCCGTCCCAACTCTGCGCAACGATCAAACTGACAGTGGCAACAACAGCAGCGTCAACAATGGCAACAACAGCAGCGTTGGCACAGTAATTGCGGGTGGCAGAAACGGTGGTAGCGTGTGCTCGAACTGTTCAACTAACAACACGAAACTGTGGCGCAGGGACCAGAAAGGAGACATTGTGTGTAACGCGTGTGGCCTGTATTTTAAACTACATGGAGCTAATCGTCCCAGCCATTTGTTTAGAGACAACCCAATGACCAGGCGCCGAAATCCGCGGTCTAGCAAGAAGAAAGATCAGATGATGATCGGGGAGGCTGACGGCGTTGCTGGTGCTGCAGTGCATCACATGGATATGGCGGGGCCTTCTTCCCTCCGAAGGACGCTTCCTCCATCCTTGTCTGTCATGGGAAGTACTGCTTCCCCTCCTTCAGCTGCAGATCCCGATACCCCGGAGGAAGTTTTTAGAGCAGCGCAAACTCTCAACTCGCTCTCCATGTTTGCTGCTCAGGCTAACGTGTCGAGACAGCATCAACAACAGCATTTGCTGCAACAGCAACAAGTGTTGCAAGGACGGCAACAAATGGAGCAGCTGCTGCATACAGGACCGAACAATTCAGTGGAAGCAATTGAAGATTTGTTTGATGATAACACTGATGTTCGCAGCGATACAGCTCTAGATGATGAAGCTTGTGACAATGATCAGGAAATGGAGGATGTTAATGGAGAGGCAGAACACCCGCAGCAGACCAGGCAAATGGGAGAAAATTGGCAGTGTTCTCGGTTGCCTCCCCCACCATTACTAAGGCTGCAGTCATCCCCGCCGTCCACCAGCCTTCTGGCGCAGTCTCCACCACAACCCGTCACTTCCTCCACTACGAGCGCCACTGGCAACAACAGCAGCCATGCCCCTACCGGCAATAAAAGTGACGCTTCTAGCAGCATCAACAGCGGTGGCGGCGGCTCTAGTAACAACAATAGCGTTCACGGCAGCAACACCATTGTCCCTAGCAGCAACACCATTGTCCCTAGCAGCAACACCATCGTCCCTAGCAGCAACACCATCGTCCCTAGCAGCAACATCATCGTCCCTAGCAGCAACACCAACATCCCTAGCAGCAACACCAACATCCCTAGCAGCAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCAACATCCCTAGCAGTAACACCAACGTTCCTAGCAACAGCGGACAGGTGTCACCCCCATCGCGTTCCAGGCAGAAGGAAGAAGAAGAAATTGGGGCGAGAGAACAGGAGCTGGAGATCGAGGACAAAGATGATACTGATCCGAAAACCATTGCTGGTGACACTAAGGAACTGGAGCCTTGA

Transcript

Hgig_18898

AGAAAAAAAGGAAGGAGTAGTGGGAGAGAGAGAGTGAGTAAGCATGGAGAGCCAGGATGTGGGGAGAGGCAGCGGCAGCATGCTGTGCCTCAAGTGGAACAGGCATGCTGACATGCTGAACAGCATGAACCAGCTCAGATTAAAGGGTCAGTTCTGCGACATGCAGCTAGCGTGTGAGAAGGAGTTGCTGCCAGCGCACCGCCTCGTGCTGGCATCATGCAGTGATTACTTCGCCATGATGCTACAGGAGACGCCCTGCGACAGCCTCGTTGTTGTGCTTAACAACGTCAGTGCCAGGGTCGTGCACTTCCTCCTCGAGTTCATGTACCTGGGGCAGGTTCAGGTACCGGAAAGTGAGCTACCGGTGCTACTGTCAACAGCAGAGGCGCTCAAGATCAAGGGTCTCATACACAACACAGACGAGTACAACTCCTTGCCAGGAGTAATGAATAGTCAAGTCTGTCCAGACAAGAGCAGATGCACGAAGAGTGTGGTGCAGCAACCAACACCCGCCACTTCGCATGTGCGCTGCAGCAGCCCAACAGCACCAGTGTCTCCTCCTCCTACCAGATCAACAAACAGCAGGAGCTGGCAGCAAACAACCGGCGGCTCTTCTTCGTCACCTGGAGCAGCAAAAGAGAGGCTACCACCACAACACCCAGCTGCGCTGCAGAAGAGAAGAGTTCTACAGCAGCCTACGCAGGGATTACCGCCACAGTATCCTCTGCCTCCTCGTGAGACCCAGAAAAGGTCTTCTCCTACTCCTATAAATGCTGCTAGTTGTACAAATGCCACCGCTGCTGGTGGTGGTGTCGGTGGTGCTTTGTCTCTGAGACGGTCTCCATCGCCATATAGCAGAAGCTACCCCGTCTCTACTCAAGTGCTAAATTCGTTCATCACCTCCCTAGCAAACAGCAATAATTCTAACGGCAGCATCAGCGGCGTGAACAGTTCACCATCAACCAGCAGCACTAATGCAAAAATCGGAGCTGGAAACACTTTGATTCAAGGAACTAGTAGACCCAGCACGAGCAGAGGAGCTTCACTTAATTCAGATGGAGCTCACAAGAGAAGAAGATCACCTGACAGCCATAGGAATGATAACAGAAACGCAGCTAAATCTGTAAAGTGTGAGGTAGTGAAAACAGAAGAACACGAATTAGAACAGCCTACCCTGATTATTGATGATAGCGAATGGTCTAGCAATAACAACAATAATAGCAGTCAGTTCTTGGAGTACCGTCCTGATGACGTCAGTAGTGAAGAGGATGAATATGAGGATGTTGTAGTTGGTGCAGGTCAGAAGCACAGAGGCATTAATACCTTAGAGTTGTTACAAGCCTCTAATGTGCAAGGTCCTCCTCGGTCAATCTCTCTCACTGGACCGAGCGGGCCGCCATCCAGACACACCTTCAACAGAACTGCGCTGGAGTCACTGAGAGATGCAGCAGCAGTTGGGTTAGGTTTGAGTAACCACTCTGGCTCACCAAGGTTCCCAACCAACCAGGCACTGGGTGTTATTGCTCCTCAATTCTTGACGCGTCCTCCTCACATGTTCACTGGAGGTAACTTCTCTCAGTTGGTATCCAGTGGTGCTGCTGGTCCTGCTCATCCACCATGGAATAGAGCACCATTATTGCACCCTCCACTTGGTGCCGTCCCAACTCTGCGCAACGATCAAACTGACAGTGGCAACAACAGCAGCGTCAACAATGGCAACAACAGCAGCGTTGGCACAGTAATTGCGGGTGGCAGAAACGGTGGTAGCGTGTGCTCGAACTGTTCAACTAACAACACGAAACTGTGGCGCAGGGACCAGAAAGGAGACATTGTGTGTAACGCGTGTGGCCTGTATTTTAAACTACATGGAGCTAATCGTCCCAGCCATTTGTTTAGAGACAACCCAATGACCAGGCGCCGAAATCCGCGGTCTAGCAAGAAGAAAGATCAGATGATGATCGGGGAGGCTGACGGCGTTGCTGGTGCTGCAGTGCATCACATGGATATGGCGGGGCCTTCTTCCCTCCGAAGGACGCTTCCTCCATCCTTGTCTGTCATGGGAAGTACTGCTTCCCCTCCTTCAGCTGCAGATCCCGATACCCCGGAGGAAGTTTTTAGAGCAGCGCAAACTCTCAACTCGCTCTCCATGTTTGCTGCTCAGGCTAACGTGTCGAGACAGCATCAACAACAGCATTTGCTGCAACAGCAACAAGTGTTGCAAGGACGGCAACAAATGGAGCAGCTGCTGCATACAGGACCGAACAATTCAGTGGAAGCAATTGAAGATTTGTTTGATGATAACACTGATGTTCGCAGCGATACAGCTCTAGATGATGAAGCTTGTGACAATGATCAGGAAATGGAGGATGTTAATGGAGAGGCAGAACACCCGCAGCAGACCAGGCAAATGGGAGAAAATTGGCAGTGTTCTCGGTTGCCTCCCCCACCATTACTAAGGCTGCAGTCATCCCCGCCGTCCACCAGCCTTCTGGCGCAGTCTCCACCACAACCCGTCACTTCCTCCACTACGAGCGCCACTGGCAACAACAGCAGCCATGCCCCTACCGGCAATAAAAGTGACGCTTCTAGCAGCATCAACAGCGGTGGCGGCGGCTCTAGTAACAACAATAGCGTTCACGGCAGCAACACCATTGTCCCTAGCAGCAACACCATTGTCCCTAGCAGCAACACCATCGTCCCTAGCAGCAACACCATCGTCCCTAGCAGCAACATCATCGTCCCTAGCAGCAACACCAACATCCCTAGCAGCAACACCAACATCCCTAGCAGCAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCAACGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCATCGTCCCTGGCAACAACACCAACATCCCTAGCAGTAACACCAACGTTCCTAGCAACAGCGGACAGGTGTCACCCCCATCGCGTTCCAGGCAGAAGGAAGAAGAAGAAATTGGGGCGAGAGAACAGGAGCTGGAGATCGAGGACAAAGATGATACTGATCCGAAAACCATTGCTGGTGACACTAAGGAACTGGAGCCTTGAGGGGCAGTTGTGAATGTAAAGCTGCTGTTTGGGGACGGAGGACACTCCCACGGGGATGTCCCAGTCCTGTGCCCTCAAGGAACACCCCCGTGAATATTGCCAACGATTGTGTAATTGACCCTATTCACGGGGGAGCAATGTAACATGAGGTGGAACATGACTTCCTTGTTGTATTTTATCCACCAAGACTGGCTATTTCCTTCCACGGAGAAGATTGGACACACCATGTGGTGGTGGATAATCTTCACCGTGAGTTTAGAAAACTAATATATCATAGTGACGTTCGGAGCGATATGACGCATGCGTCAATGCACTAGTAAACCGGGGCAAGCTTCGCCTTTTATTAACTGACTATCGTGTGTGCGTTGTTT

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-GATA
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB
Transcription Factors Family	ZBTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00320	GATA	GATA zinc finger	Domain	Interproscan
PF00651	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR000679	Domain	Zinc finger, GATA-type	Interproscan
IPR011049	Homologous_superfamily	Serralysin-like metalloprotease, C-terminal	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR013088	Homologous_superfamily	Zinc finger, NHR/GATA-type	Interproscan
IPR051095	Family	Drosophila Developmental Transcription Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23110	BTB DOMAIN TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-